RNA id: TU160582



Basic Information


Item Value
RNA id TU160582
length 327
lncRNA type inter_gene
GC content 0.36
exon number 2
gene id G119173
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31227107 ~ 31235412 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gttcatattactgcctgtagtatctgtatagactactgttcatattactgcctgtagtatctgtatagactactgttcatattactgcctgtagtaaccagccaaaagtaaaaggcgtatcacaaaactgagcagattttctgaaacttgacaaaaatacctacgttttgatgtataaattgtgtatgagaagtagatattgtgggcgtgagaacaatttattgagaagggacaaagataattttttcgaagcttcaccctctacctatgacatcatccactctagctcacgcaatacacactctgtttaatcgataacatttcctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160585 lncRNA downstream 24000 31202542 ~ 31203107 (-) True G119176
TU160580 lncRNA downstream 29131 31177387 ~ 31197976 (-) True G119171
TU160579 lncRNA downstream 29131 31182842 ~ 31197976 (-) False G119171
XR_005640806.1 lncRNA downstream 350996 30864907 ~ 30876111 (-) False LOC120568929
TU160451 lncRNA downstream 431323 30794967 ~ 30795784 (-) True G119073
TU160618 lncRNA upstream 44910 31280322 ~ 31282095 (-) True G119204
TU160631 lncRNA upstream 114298 31349710 ~ 31349984 (-) True G119216
TU160646 lncRNA upstream 141928 31377340 ~ 31377550 (-) True G119231
TU160648 lncRNA upstream 148521 31383933 ~ 31384236 (-) True G119233
TU160651 lncRNA upstream 151297 31386709 ~ 31386914 (-) True G119236
XM_039816682.1 mRNA downstream 24915 31200541 ~ 31202192 (-) True LOC120568926
XM_039816680.1 mRNA downstream 71382 31049685 ~ 31155725 (-) False LOC120568925
XM_039816681.1 mRNA downstream 71383 31040284 ~ 31155724 (-) False LOC120568925
XM_039816679.1 mRNA downstream 71384 31040284 ~ 31155723 (-) True LOC120568925
XM_039814580.1 mRNA downstream 501027 30717405 ~ 30726080 (-) True LOC120567647
XM_039816425.1 mRNA upstream 220187 31455599 ~ 31457157 (-) True LOC120568745
XM_039815925.1 mRNA upstream 234183 31469595 ~ 31575193 (-) False zeb1a
XM_039815926.1 mRNA upstream 234183 31469595 ~ 31573690 (-) True zeb1a
XM_039816310.1 mRNA upstream 446788 31682200 ~ 31692546 (-) True LOC120568656
XM_039816309.1 mRNA upstream 461391 31696803 ~ 31710791 (-) False LOC120568655
TU160586 other downstream 52156 31126430 ~ 31174951 (-) True G119177
TU160575 other downstream 55497 31169922 ~ 31171610 (-) True G119169
TU160576 other downstream 55497 31170382 ~ 31171610 (-) False G119169
TU160545 other downstream 351027 30864246 ~ 30876080 (-) True LOC120568929
TU160542 other downstream 361613 30864246 ~ 30865494 (-) False LOC120568929
TU160692 other upstream 254840 31490252 ~ 31575190 (-) False zeb1a
TU160835 other upstream 812065 32047477 ~ 32051439 (-) True G119379
TU160944 other upstream 981090 32216502 ~ 32226360 (-) False G119465
TU160945 other upstream 983095 32218507 ~ 32226360 (-) True G119465
TU161095 other upstream 1526933 32762345 ~ 32765076 (-) False fcer1gl

Expression Profile