RNA id: TU160593



Basic Information


Item Value
RNA id TU160593
length 209
lncRNA type sense_over
GC content 0.50
exon number 2
gene id G119184
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31184991 ~ 31244376 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtgtgtctgtgtgtgcttgcgtgtgtgtgtttgagtgtctgtgtgtctgtgtgtgtgtgtctgtctgtgtgtgtgtgtgtgtgtctttgtgtgtgtgtgtgcgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005640806.1 lncRNA downstream 308880 30864907 ~ 30876111 (-) False LOC120568929
TU160451 lncRNA downstream 389207 30794967 ~ 30795784 (-) True G119073
TU160405 lncRNA downstream 736830 30440889 ~ 30448161 (-) True LOC120568429
TU160366 lncRNA downstream 865153 30316096 ~ 30319838 (-) True G119014
TU160363 lncRNA downstream 909644 30274707 ~ 30275347 (-) True G119012
TU160618 lncRNA upstream 35946 31280322 ~ 31282095 (-) True G119204
TU160631 lncRNA upstream 105334 31349710 ~ 31349984 (-) True G119216
TU160646 lncRNA upstream 132964 31377340 ~ 31377550 (-) True G119231
TU160648 lncRNA upstream 139557 31383933 ~ 31384236 (-) True G119233
TU160651 lncRNA upstream 142333 31386709 ~ 31386914 (-) True G119236
XM_039816680.1 mRNA downstream 29266 31049685 ~ 31155725 (-) False LOC120568925
XM_039816681.1 mRNA downstream 29267 31040284 ~ 31155724 (-) False LOC120568925
XM_039816679.1 mRNA downstream 29268 31040284 ~ 31155723 (-) True LOC120568925
XM_039814580.1 mRNA downstream 458911 30717405 ~ 30726080 (-) True LOC120567647
XM_039816285.1 mRNA downstream 660129 30495042 ~ 30524862 (-) False LOC120568640
XM_039816425.1 mRNA upstream 211223 31455599 ~ 31457157 (-) True LOC120568745
XM_039815925.1 mRNA upstream 225219 31469595 ~ 31575193 (-) False zeb1a
XM_039815926.1 mRNA upstream 225219 31469595 ~ 31573690 (-) True zeb1a
XM_039816310.1 mRNA upstream 437824 31682200 ~ 31692546 (-) True LOC120568656
XM_039816309.1 mRNA upstream 452427 31696803 ~ 31710791 (-) False LOC120568655
TU160586 other downstream 10040 31126430 ~ 31174951 (-) True G119177
TU160575 other downstream 13381 31169922 ~ 31171610 (-) True G119169
TU160576 other downstream 13381 31170382 ~ 31171610 (-) False G119169
TU160545 other downstream 308911 30864246 ~ 30876080 (-) True LOC120568929
TU160542 other downstream 319497 30864246 ~ 30865494 (-) False LOC120568929
TU160692 other upstream 245876 31490252 ~ 31575190 (-) False zeb1a
TU160835 other upstream 803101 32047477 ~ 32051439 (-) True G119379
TU160944 other upstream 972126 32216502 ~ 32226360 (-) False G119465
TU160945 other upstream 974131 32218507 ~ 32226360 (-) True G119465
TU161095 other upstream 1517969 32762345 ~ 32765076 (-) False fcer1gl

Expression Profile