RNA id: TU160631



Basic Information


Item Value
RNA id TU160631
length 275
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G119216
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31349710 ~ 31349984 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCcttgtggacaaaataaaacaccagcatattacaacatgagaaacatcacattcatagcCTTAATTATTACAAGCCACTTCCAAAAACGCATTCATAACGAATCAGTACAATTGCAAGAAAGGCGAAAAAGAAAGTTGATCTGTATATATGCCTTAATCGCCTCCCAGTGATTGCTAACATCAAaggaacattttgttttgggttgatctgaaacaataataggcctataattTCCTCATTGTAATATTGTAGCCTCCCTTCGGCGTAGGCTAT

Function


GO: NA

KEGG:

id description
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160618 lncRNA downstream 67615 31280322 ~ 31282095 (-) True G119204
TU160593 lncRNA downstream 105334 31184991 ~ 31244376 (-) True G119184
TU160589 lncRNA downstream 111894 31184587 ~ 31237816 (-) True G119180
TU160582 lncRNA downstream 114298 31227107 ~ 31235412 (-) True G119173
TU160585 lncRNA downstream 146603 31202542 ~ 31203107 (-) True G119176
TU160646 lncRNA upstream 27356 31377340 ~ 31377550 (-) True G119231
TU160648 lncRNA upstream 33949 31383933 ~ 31384236 (-) True G119233
TU160651 lncRNA upstream 36725 31386709 ~ 31386914 (-) True G119236
XR_005640608.1 lncRNA upstream 52319 31402303 ~ 31405348 (-) True LOC120567738
TU160660 lncRNA upstream 57470 31407454 ~ 31407854 (-) True G119245
XM_039816682.1 mRNA downstream 147518 31200541 ~ 31202192 (-) True LOC120568926
XM_039816680.1 mRNA downstream 193985 31049685 ~ 31155725 (-) False LOC120568925
XM_039816681.1 mRNA downstream 193986 31040284 ~ 31155724 (-) False LOC120568925
XM_039816679.1 mRNA downstream 193987 31040284 ~ 31155723 (-) True LOC120568925
XM_039814580.1 mRNA downstream 623630 30717405 ~ 30726080 (-) True LOC120567647
XM_039816425.1 mRNA upstream 105615 31455599 ~ 31457157 (-) True LOC120568745
XM_039815925.1 mRNA upstream 119611 31469595 ~ 31575193 (-) False zeb1a
XM_039815926.1 mRNA upstream 119611 31469595 ~ 31573690 (-) True zeb1a
XM_039816310.1 mRNA upstream 332216 31682200 ~ 31692546 (-) True LOC120568656
XM_039816309.1 mRNA upstream 346819 31696803 ~ 31710791 (-) False LOC120568655
TU160586 other downstream 174759 31126430 ~ 31174951 (-) True G119177
TU160575 other downstream 178100 31169922 ~ 31171610 (-) True G119169
TU160576 other downstream 178100 31170382 ~ 31171610 (-) False G119169
TU160545 other downstream 473630 30864246 ~ 30876080 (-) True LOC120568929
TU160542 other downstream 484216 30864246 ~ 30865494 (-) False LOC120568929
TU160692 other upstream 140268 31490252 ~ 31575190 (-) False zeb1a
TU160835 other upstream 697493 32047477 ~ 32051439 (-) True G119379
TU160944 other upstream 866518 32216502 ~ 32226360 (-) False G119465
TU160945 other upstream 868523 32218507 ~ 32226360 (-) True G119465
TU161095 other upstream 1412361 32762345 ~ 32765076 (-) False fcer1gl

Expression Profile