RNA id: TU160646



Basic Information


Item Value
RNA id TU160646
length 211
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G119231
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 31377340 ~ 31377550 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cagttactgaaggctagctttagcttgtgcttggagcagcaagttcatctgcctgtttcccctctgtctgtcagtctcgttctttccaactcttgaggctagttcttcgtctgtatactcgggttcgaataaataaggacgaccatcaaactcaaaaggctcttccgtgtgttgtatatctgctatattcttcatactccaagcttcttcc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160631 lncRNA downstream 27356 31349710 ~ 31349984 (-) True G119216
TU160618 lncRNA downstream 95245 31280322 ~ 31282095 (-) True G119204
TU160593 lncRNA downstream 132964 31184991 ~ 31244376 (-) True G119184
TU160589 lncRNA downstream 139524 31184587 ~ 31237816 (-) True G119180
TU160648 lncRNA upstream 6383 31383933 ~ 31384236 (-) True G119233
TU160651 lncRNA upstream 9159 31386709 ~ 31386914 (-) True G119236
XR_005640608.1 lncRNA upstream 24753 31402303 ~ 31405348 (-) True LOC120567738
TU160660 lncRNA upstream 29904 31407454 ~ 31407854 (-) True G119245
TU160661 lncRNA upstream 31371 31408921 ~ 31409177 (-) True G119246
XM_039816682.1 mRNA downstream 175148 31200541 ~ 31202192 (-) True LOC120568926
XM_039816680.1 mRNA downstream 221615 31049685 ~ 31155725 (-) False LOC120568925
XM_039816681.1 mRNA downstream 221616 31040284 ~ 31155724 (-) False LOC120568925
XM_039816679.1 mRNA downstream 221617 31040284 ~ 31155723 (-) True LOC120568925
XM_039814580.1 mRNA downstream 651260 30717405 ~ 30726080 (-) True LOC120567647
XM_039816425.1 mRNA upstream 78049 31455599 ~ 31457157 (-) True LOC120568745
XM_039815925.1 mRNA upstream 92045 31469595 ~ 31575193 (-) False zeb1a
XM_039815926.1 mRNA upstream 92045 31469595 ~ 31573690 (-) True zeb1a
XM_039816310.1 mRNA upstream 304650 31682200 ~ 31692546 (-) True LOC120568656
XM_039816309.1 mRNA upstream 319253 31696803 ~ 31710791 (-) False LOC120568655
TU160586 other downstream 202389 31126430 ~ 31174951 (-) True G119177
TU160575 other downstream 205730 31169922 ~ 31171610 (-) True G119169
TU160576 other downstream 205730 31170382 ~ 31171610 (-) False G119169
TU160545 other downstream 501260 30864246 ~ 30876080 (-) True LOC120568929
TU160542 other downstream 511846 30864246 ~ 30865494 (-) False LOC120568929
TU160692 other upstream 112702 31490252 ~ 31575190 (-) False zeb1a
TU160835 other upstream 669927 32047477 ~ 32051439 (-) True G119379
TU160944 other upstream 838952 32216502 ~ 32226360 (-) False G119465
TU160945 other upstream 840957 32218507 ~ 32226360 (-) True G119465
TU161095 other upstream 1384795 32762345 ~ 32765076 (-) False fcer1gl

Expression Profile