RNA id: TU160959



Basic Information


Item Value
RNA id TU160959
length 297
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G119479
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32403526 ~ 32419889 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATTCAATAAAACAGTTAATATAGTACGATTTTTACCTGGTAGAGGACCAATAGTCTCTGATGATTACTCTGGAAGGATTGAGGTGCTTGAGAACTACTGTGTGAAATTGAAGAATCTACAAGAGGCAGACAGTGGAGTTTATATTGCAGTAGTGTCTGGggataaagaaaaacaaataactgGATACAAGATCACAGTTCAAGATCCAGTGTCTCCAGTTAAACTGTCAGTGGACTCTGTGTCTAACAGCTCAGACTGGTGTAACCTGACAGTGAGCTGCAGAGCACAGGACTCTCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160958 lncRNA downstream 38432 32364859 ~ 32365094 (-) False LOC120568568
TU160957 lncRNA downstream 38745 32364461 ~ 32364781 (-) False LOC120568568
XR_005640733.1 lncRNA downstream 50845 32330829 ~ 32352681 (-) True LOC120568563
TU160952 lncRNA downstream 73454 32326772 ~ 32330072 (-) True G119472
TU160933 lncRNA downstream 279036 32123339 ~ 32124490 (-) True G119455
TU160974 lncRNA upstream 18938 32438827 ~ 32454048 (-) True G119492
TU161013 lncRNA upstream 146083 32565972 ~ 32566391 (-) True G119523
TU161018 lncRNA upstream 150108 32569997 ~ 32570682 (-) True G119528
TU161066 lncRNA upstream 173485 32593374 ~ 32594044 (-) True G119567
TU161069 lncRNA upstream 229800 32649689 ~ 32649976 (-) True G119570
XM_039816160.1 mRNA downstream 29008 32364719 ~ 32374518 (-) True LOC120568568
XM_039816637.1 mRNA downstream 536829 31865738 ~ 31866697 (-) True LOC120568891
XM_039816634.1 mRNA downstream 543448 31838382 ~ 31860078 (-) True kcnj9
XM_039816983.1 mRNA downstream 582102 31802504 ~ 31821424 (-) False LOC120569109
XM_039816984.1 mRNA downstream 588422 31802504 ~ 31815104 (-) True LOC120569109
XM_039816157.1 mRNA upstream 68928 32488817 ~ 32513979 (-) False LOC120568565
XM_039816155.1 mRNA upstream 68928 32488817 ~ 32513978 (-) False LOC120568565
XM_039816153.1 mRNA upstream 68928 32488817 ~ 32513978 (-) True LOC120568565
XM_039816154.1 mRNA upstream 68928 32488817 ~ 32500101 (-) False LOC120568565
XM_039816156.1 mRNA upstream 71779 32491668 ~ 32513982 (-) False LOC120568565
TU160944 other downstream 177166 32216502 ~ 32226360 (-) False G119465
TU160945 other downstream 177166 32218507 ~ 32226360 (-) True G119465
TU160835 other downstream 352087 32047477 ~ 32051439 (-) True G119379
TU160692 other downstream 828336 31490252 ~ 31575190 (-) False zeb1a
TU160576 other downstream 1231916 31170382 ~ 31171610 (-) False G119169
TU161095 other upstream 342456 32762345 ~ 32765076 (-) False fcer1gl
TU161097 other upstream 342456 32762345 ~ 32765076 (-) False fcer1gl
TU161088 other upstream 342558 32762447 ~ 32765151 (-) False fcer1gl
TU161089 other upstream 342558 32762447 ~ 32765151 (-) False fcer1gl
TU161092 other upstream 342558 32762447 ~ 32765151 (-) False fcer1gl

Expression Profile