RNA id: TU160974



Basic Information


Item Value
RNA id TU160974
length 291
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G119492
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32438827 ~ 32454048 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGGCAGAAATGTTTAATTATTTTCATGTCCTTGGTCCAGCTGACCTGGTTGCTATGGTTACAGATGATGGAGCCATTGGACAGGTAGACATGGAGATCAGCAGCAGAGGGTGTGACCTGtggtctctctcctccctcctgacTGCAGGTGTGGGTGTCACATCTAAAGGTGCTGTTAATGTGAGAGTCCTGTGCTCTGCAGCTCACTGTCAGGTTACACCAGTCTGAGCTGTTAGACACAGAGTCCACTGACAGTTTAACTGGAGACACTGGATCTGAGGGGGGAGAGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU160959 lncRNA downstream 18938 32403526 ~ 32419889 (-) True G119479
TU160962 lncRNA downstream 19832 32417963 ~ 32418995 (-) True G119482
TU160958 lncRNA downstream 73733 32364859 ~ 32365094 (-) False LOC120568568
TU160957 lncRNA downstream 74046 32364461 ~ 32364781 (-) False LOC120568568
XR_005640733.1 lncRNA downstream 86146 32330829 ~ 32352681 (-) True LOC120568563
TU161013 lncRNA upstream 111924 32565972 ~ 32566391 (-) True G119523
TU161018 lncRNA upstream 115949 32569997 ~ 32570682 (-) True G119528
TU161066 lncRNA upstream 139326 32593374 ~ 32594044 (-) True G119567
TU161069 lncRNA upstream 195641 32649689 ~ 32649976 (-) True G119570
TU161099 lncRNA upstream 303162 32757210 ~ 32757652 (-) True G119590
XM_039816160.1 mRNA downstream 64309 32364719 ~ 32374518 (-) True LOC120568568
XM_039816637.1 mRNA downstream 572130 31865738 ~ 31866697 (-) True LOC120568891
XM_039816634.1 mRNA downstream 578749 31838382 ~ 31860078 (-) True kcnj9
XM_039816983.1 mRNA downstream 617403 31802504 ~ 31821424 (-) False LOC120569109
XM_039816157.1 mRNA upstream 34769 32488817 ~ 32513979 (-) False LOC120568565
XM_039816155.1 mRNA upstream 34769 32488817 ~ 32513978 (-) False LOC120568565
XM_039816153.1 mRNA upstream 34769 32488817 ~ 32513978 (-) True LOC120568565
XM_039816154.1 mRNA upstream 34769 32488817 ~ 32500101 (-) False LOC120568565
XM_039816156.1 mRNA upstream 37620 32491668 ~ 32513982 (-) False LOC120568565
TU160944 other downstream 212467 32216502 ~ 32226360 (-) False G119465
TU160945 other downstream 212467 32218507 ~ 32226360 (-) True G119465
TU160835 other downstream 387388 32047477 ~ 32051439 (-) True G119379
TU160692 other downstream 863637 31490252 ~ 31575190 (-) False zeb1a
TU160576 other downstream 1267217 31170382 ~ 31171610 (-) False G119169
TU161095 other upstream 308297 32762345 ~ 32765076 (-) False fcer1gl
TU161097 other upstream 308297 32762345 ~ 32765076 (-) False fcer1gl
TU161088 other upstream 308399 32762447 ~ 32765151 (-) False fcer1gl
TU161089 other upstream 308399 32762447 ~ 32765151 (-) False fcer1gl
TU161092 other upstream 308399 32762447 ~ 32765151 (-) False fcer1gl

Expression Profile