RNA id: TU161069



Basic Information


Item Value
RNA id TU161069
length 288
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G119570
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32649689 ~ 32649976 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atataattaggcgcactttacgcttcccctcccatctctttatgggaaacttccactttccccttgaccctcccgtgaatgcatatgcatgacacggaaaagtgaaatttgccattttcagttcccgcgacaggcagtctgcgcttttacctcagtgcggcctgtttgtacatacctcgccatgctttttacgcgcacgttgcgaaacaaatacgcctgaagtcggcgcaaaagcgttagtacatctggcccaGAGTGTACTACAGTAATCACAATACAAACGTCCAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161066 lncRNA downstream 55645 32593374 ~ 32594044 (-) True G119567
TU161018 lncRNA downstream 79007 32569997 ~ 32570682 (-) True G119528
TU161013 lncRNA downstream 83298 32565972 ~ 32566391 (-) True G119523
TU160974 lncRNA downstream 195641 32438827 ~ 32454048 (-) True G119492
TU160959 lncRNA downstream 229800 32403526 ~ 32419889 (-) True G119479
TU161099 lncRNA upstream 107234 32757210 ~ 32757652 (-) True G119590
TU161102 lncRNA upstream 110596 32760572 ~ 32760843 (-) True G119593
TU161093 lncRNA upstream 110993 32760969 ~ 32765076 (-) True fcer1gl
TU161096 lncRNA upstream 112471 32762447 ~ 32765151 (-) False fcer1gl
TU161098 lncRNA upstream 112471 32762447 ~ 32765211 (-) False fcer1gl
XM_039816022.1 mRNA downstream 2301 32629442 ~ 32647388 (-) True si:dkeyp-68b7.12
XM_039816003.1 mRNA downstream 26598 32618046 ~ 32623091 (-) True LOC120568450
XM_039815974.1 mRNA downstream 34791 32603143 ~ 32614898 (-) True LOC120568440
XM_039816000.1 mRNA downstream 49233 32594658 ~ 32600456 (-) True LOC120568447
XM_039816152.1 mRNA downstream 94000 32538197 ~ 32555689 (-) False LOC120568564
XM_039815994.1 mRNA upstream 9559 32659535 ~ 32713327 (-) True tesk2
XM_039815996.1 mRNA upstream 74824 32724800 ~ 32754122 (-) False nectin4b
XM_039815995.1 mRNA upstream 74824 32724800 ~ 32754122 (-) True nectin4b
XM_039816019.1 mRNA upstream 112396 32762372 ~ 32765158 (-) False fcer1gl
XM_039816021.1 mRNA upstream 112396 32762372 ~ 32765151 (-) False fcer1gl
TU160944 other downstream 423329 32216502 ~ 32226360 (-) False G119465
TU160945 other downstream 423329 32218507 ~ 32226360 (-) True G119465
TU160835 other downstream 598250 32047477 ~ 32051439 (-) True G119379
TU160692 other downstream 1074499 31490252 ~ 31575190 (-) False zeb1a
TU160576 other downstream 1478079 31170382 ~ 31171610 (-) False G119169
TU161095 other upstream 112369 32762345 ~ 32765076 (-) False fcer1gl
TU161097 other upstream 112369 32762345 ~ 32765076 (-) False fcer1gl
TU161088 other upstream 112471 32762447 ~ 32765151 (-) False fcer1gl
TU161089 other upstream 112471 32762447 ~ 32765151 (-) False fcer1gl
TU161092 other upstream 112471 32762447 ~ 32765151 (-) False fcer1gl

Expression Profile