RNA id: TU161092



Basic Information


Item Value
RNA id TU161092
length 581
RNA type TUCP
GC content 0.49
exon number 5
gene id fcer1gl
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32760969 ~ 32765211 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCGGACTTCCTGTTCGCTGCTGTTCACAGAGCTCACTTCAGAgggcttttttctttcttttttttaaagagatcTCGCTGACAGCCGACAAGGGAGCATCAAAACCGACCCTTCATCTTATCTACAGCTCAGTCGGTAAGATGGCACACGCATCGCTCATCGCTGTCTTTCTGATTATCTGTCCCACCTGCGCCGAGGCCATCAGCGACATGAACGTGTGTTTCATCCTGGATGGGATTCTCATCCTTTACGGCGTCATTCTCACCGTCCTATACTGCAGACTGAGGATGGGCCCAGCCAAGAAAACGCCTGCCAACCCCGCTGAGAAGCAGCCCGCTGAGGGAGGCATCTATGCGGGTCTGACCTCTCAAAGCACCGATACCTACGAGACCATCAAAATGGATAAAAAGCCTATCGTCTGATGGAGGAACAGGGCCGGGTGCAGAGAGGACGCTGAGCACACAAACGCAGTGTCAAATCTCTCCAagctttatactgtatattagttGCGTGACTTTCTATACATGACTTTTCTCCCTTttccttttgtaaaaaaaaaattatactacTCCCATTTCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161102 lncRNA downstream 1604 32760572 ~ 32760843 (-) True G119593
TU161099 lncRNA downstream 4795 32757210 ~ 32757652 (-) True G119590
TU161069 lncRNA downstream 112471 32649689 ~ 32649976 (-) True G119570
TU161066 lncRNA downstream 168403 32593374 ~ 32594044 (-) True G119567
TU161018 lncRNA downstream 191765 32569997 ~ 32570682 (-) True G119528
TU161147 lncRNA upstream 84568 32849719 ~ 32865274 (-) False G119631
XR_005640731.1 lncRNA upstream 173550 32938701 ~ 32940160 (-) False LOC120568464
TU161164 lncRNA upstream 173565 32938716 ~ 32940130 (-) False LOC120568464
TU161165 lncRNA upstream 173565 32938716 ~ 32940130 (-) True LOC120568464
TU161209 lncRNA upstream 207524 32972675 ~ 32973003 (-) True G119686
XM_039815996.1 mRNA downstream 8325 32724800 ~ 32754122 (-) False nectin4b
XM_039815995.1 mRNA downstream 8325 32724800 ~ 32754122 (-) True nectin4b
XM_039815994.1 mRNA downstream 49120 32659535 ~ 32713327 (-) True tesk2
XM_039816022.1 mRNA downstream 115059 32629442 ~ 32647388 (-) True si:dkeyp-68b7.12
XM_039816003.1 mRNA downstream 139356 32618046 ~ 32623091 (-) True LOC120568450
XM_039815997.1 mRNA upstream 3444 32768595 ~ 32793782 (-) False LOC120568446
XM_039815999.1 mRNA upstream 3444 32768595 ~ 32793505 (-) True LOC120568446
XM_039815975.1 mRNA upstream 30946 32796097 ~ 32815490 (-) True ncstn
XM_039814664.1 mRNA upstream 50697 32815848 ~ 32827320 (-) True copa
XM_039814665.1 mRNA upstream 63213 32828364 ~ 32832509 (-) True LOC120567697
TU160944 other downstream 536087 32216502 ~ 32226360 (-) False G119465
TU160945 other downstream 536087 32218507 ~ 32226360 (-) True G119465
TU160835 other downstream 711008 32047477 ~ 32051439 (-) True G119379
TU160692 other downstream 1187257 31490252 ~ 31575190 (-) False zeb1a
TU160576 other downstream 1590837 31170382 ~ 31171610 (-) False G119169
TU161133 other upstream 63234 32828385 ~ 32832493 (-) False LOC120567697
TU161146 other upstream 84568 32849719 ~ 32852397 (-) True G119631
XR_005640728.1 other upstream 454573 33219724 ~ 33256936 (-) False LOC120568437
TU161606 other upstream 889151 33654302 ~ 33659276 (-) True G119989
unassigned_transcript_565 other upstream 1419865 34185016 ~ 34185088 (-) True trnak-cuu_2

Expression Profile