RNA id: TU161133



Basic Information


Item Value
RNA id TU161133
length 748
RNA type TUCP
GC content 0.51
exon number 7
gene id LOC120567697
representative False

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 32828364 ~ 32832509 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGCTACGTGTCAGGGAAAAGGAGAATACAGCTAAATGGGCGAAGGCGATCAGGCCGCCTGAGTTAACTTGTCTGGAATATTTGAGTTGTTTTAATTGTTGGTTTGGGGTTAATTTTTGCCACGGCATTGACATTGCGACTTGTATTCTTGTCAAGTGACGATGTTAACAAAATTTGAGACGAAGTCGGCCCGTGTCAAAGGCCTAAGTTTCCATCCGAAGAGACCATGGGTTCTTGCAAGTTTGCACAACGGAGTCATCCAGCTGTGGGACTATCGCATGTGCACGCTGATTGACAAGTTTGACGAGCATGATGGTCCCGTCAGAGGAATTGATTTCCACAAACAGCAGCCTCTGTTTGTGTCTGGAGGAGATGATTACAAAATCAAGGTGTGGAACTACAAGTTGAGACGCTGCCTCTTCACTCTCCTTGGACACCTTGACTACATCAGAACCACCTTCTTCCACCATGAGTACCCCTGGATTCTGAGCGCCTCAGATGACCAGACTATTCGCATCTGGAACTGGCAGTCCAGGACCTGCGTCTGTGTGCTCACCGGCCATAATCACTATGTGATGTGCGCCCAGTTCCACCCAGCTGAGGACCTGGTGGTGTCGGCCAGTCTGGACCAGACCGTGCGCGTGTGGGATATTTCCGGTCTGAGGAAGAAGAACCTGTCTCCAGGCTCTGTGGAGACGGACGTGCGCGGCATCTCTGGCGTCGACTTGTTCGGTGCCTCGGATGCTGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU161098 lncRNA downstream 63174 32762447 ~ 32765211 (-) False fcer1gl
TU161096 lncRNA downstream 63234 32762447 ~ 32765151 (-) False fcer1gl
TU161093 lncRNA downstream 63309 32760969 ~ 32765076 (-) True fcer1gl
TU161102 lncRNA downstream 67542 32760572 ~ 32760843 (-) True G119593
TU161099 lncRNA downstream 70733 32757210 ~ 32757652 (-) True G119590
TU161147 lncRNA upstream 17226 32849719 ~ 32865274 (-) False G119631
XR_005640731.1 lncRNA upstream 106208 32938701 ~ 32940160 (-) False LOC120568464
TU161164 lncRNA upstream 106223 32938716 ~ 32940130 (-) False LOC120568464
TU161165 lncRNA upstream 106223 32938716 ~ 32940130 (-) True LOC120568464
TU161209 lncRNA upstream 140182 32972675 ~ 32973003 (-) True G119686
XM_039814664.1 mRNA downstream 1065 32815848 ~ 32827320 (-) True copa
XM_039815975.1 mRNA downstream 12895 32796097 ~ 32815490 (-) True ncstn
XM_039815997.1 mRNA downstream 34603 32768595 ~ 32793782 (-) False LOC120568446
XM_039815999.1 mRNA downstream 34880 32768595 ~ 32793505 (-) True LOC120568446
XM_039816019.1 mRNA downstream 63227 32762372 ~ 32765158 (-) False fcer1gl
XM_039816015.1 mRNA upstream 1023 32833516 ~ 32840858 (-) True pex19
XM_039815973.1 mRNA upstream 33453 32865946 ~ 32886957 (-) True nfatc4
XM_039816002.1 mRNA upstream 112891 32945384 ~ 32952954 (-) True mettl17
XM_039816016.1 mRNA upstream 135403 32967896 ~ 32976355 (-) True si:ch211-284o19.8
XM_039816017.1 mRNA upstream 146821 32979314 ~ 32988559 (-) True zgc:66427
TU161088 other downstream 63234 32762447 ~ 32765151 (-) False fcer1gl
TU161089 other downstream 63234 32762447 ~ 32765151 (-) False fcer1gl
TU161092 other downstream 63234 32762447 ~ 32765151 (-) False fcer1gl
TU161095 other downstream 63309 32762345 ~ 32765076 (-) False fcer1gl
TU161097 other downstream 63309 32762345 ~ 32765076 (-) False fcer1gl
TU161146 other upstream 17226 32849719 ~ 32852397 (-) True G119631
XR_005640728.1 other upstream 387231 33219724 ~ 33256936 (-) False LOC120568437
TU161606 other upstream 821809 33654302 ~ 33659276 (-) True G119989
unassigned_transcript_565 other upstream 1352523 34185016 ~ 34185088 (-) True trnak-cuu_2
TU161838 other upstream 1396133 34228626 ~ 34229050 (-) True G120168

Expression Profile