Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU161328 |
| length | 656 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 3 |
| gene id | G119763 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 33268370 ~ 33269202 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0000041 | transition metal ion transport | biological_process |
| GO:0006826 | iron ion transport | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU161305 | lncRNA | upstream | 75171 | 33192587 ~ 33193199 (+) | True | G119744 |
| TU161290 | lncRNA | upstream | 82478 | 33181456 ~ 33185892 (+) | True | G119733 |
| XR_005640730.1 | lncRNA | upstream | 102272 | 33163933 ~ 33166098 (+) | False | LOC120568463 |
| TU161156 | lncRNA | upstream | 370352 | 32897747 ~ 32898018 (+) | True | G119640 |
| TU161155 | lncRNA | upstream | 370902 | 32897115 ~ 32897468 (+) | True | G119639 |
| TU161341 | lncRNA | downstream | 21128 | 33290330 ~ 33290580 (+) | True | G119767 |
| TU161485 | lncRNA | downstream | 244809 | 33514011 ~ 33515423 (+) | False | pkn2a |
| TU161502 | lncRNA | downstream | 268970 | 33538172 ~ 33562071 (+) | True | G119901 |
| TU161526 | lncRNA | downstream | 328671 | 33597873 ~ 33598657 (+) | True | G119922 |
| TU161561 | lncRNA | downstream | 541874 | 33811076 ~ 33851937 (+) | True | gng12a |
| XM_039816011.1 | mRNA | upstream | 87782 | 33126780 ~ 33180588 (+) | True | LOC120568455 |
| XM_039816012.1 | mRNA | upstream | 118078 | 33126780 ~ 33150292 (+) | False | LOC120568455 |
| XM_039814666.1 | mRNA | upstream | 141570 | 33075783 ~ 33126800 (+) | True | LOC120567698 |
| XM_039815989.1 | mRNA | upstream | 198317 | 33051009 ~ 33070053 (+) | False | apol1 |
| XM_039815267.1 | mRNA | downstream | 3915 | 33273117 ~ 33285466 (+) | True | gk5 |
| XM_039815269.1 | mRNA | downstream | 22986 | 33292188 ~ 33298786 (+) | True | atp1b3a |
| XM_039815127.1 | mRNA | downstream | 87305 | 33356507 ~ 33365322 (+) | False | stk25b |
| XM_039815125.1 | mRNA | downstream | 87306 | 33356508 ~ 33365322 (+) | True | stk25b |
| XM_039816506.1 | mRNA | downstream | 139486 | 33408688 ~ 33410016 (+) | True | LOC120568799 |
| TU161294 | other | upstream | 102270 | 33163916 ~ 33166100 (+) | True | LOC120568463 |
| XR_005640727.1 | other | upstream | 221236 | 32989790 ~ 33047134 (+) | False | tep1 |
| TU161084 | other | upstream | 486899 | 32780988 ~ 32781471 (+) | True | G119585 |
| TU161083 | other | upstream | 492688 | 32775074 ~ 32775682 (+) | True | G119584 |
| TU161081 | other | upstream | 498518 | 32768707 ~ 32769852 (+) | True | G119582 |
| TU161343 | other | downstream | 35620 | 33304822 ~ 33307864 (+) | True | G119769 |
| unassigned_transcript_564 | other | downstream | 133049 | 33402251 ~ 33402322 (+) | True | trnap-ugg_4 |
| TU161565 | other | downstream | 589340 | 33858542 ~ 33859847 (+) | True | G119957 |
| TU161681 | other | downstream | 685981 | 33955183 ~ 33957504 (+) | True | LOC120568585 |
| TU161769 | other | downstream | 894901 | 34164103 ~ 34165846 (+) | False | mrpl34 |
