Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162124 |
| length | 236 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G120395 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 34917300 ~ 34917535 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| ko04020 | Calcium signaling pathway |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162123 | lncRNA | downstream | 11920 | 34905157 ~ 34905380 (-) | True | G120394 |
| TU162108 | lncRNA | downstream | 90537 | 34826520 ~ 34826763 (-) | True | G120379 |
| TU162103 | lncRNA | downstream | 97711 | 34809896 ~ 34819589 (-) | True | G120374 |
| TU162100 | lncRNA | downstream | 124535 | 34787208 ~ 34792765 (-) | False | LOC120568808 |
| TU162091 | lncRNA | downstream | 172642 | 34741217 ~ 34744658 (-) | True | G120365 |
| TU162147 | lncRNA | upstream | 47610 | 34965145 ~ 34965538 (-) | False | G120416 |
| TU162148 | lncRNA | upstream | 47610 | 34965145 ~ 34965538 (-) | True | G120416 |
| TU162152 | lncRNA | upstream | 51607 | 34969142 ~ 34969564 (-) | True | G120420 |
| TU162160 | lncRNA | upstream | 76317 | 34993852 ~ 34994744 (-) | True | G120427 |
| TU162162 | lncRNA | upstream | 92670 | 35010205 ~ 35011036 (-) | True | G120429 |
| XM_039814672.1 | mRNA | downstream | 25050 | 34890901 ~ 34892250 (-) | True | LOC120567703 |
| XM_039814671.1 | mRNA | downstream | 44179 | 34871784 ~ 34873121 (-) | True | LOC120567702 |
| XM_039816476.1 | mRNA | downstream | 53673 | 34862052 ~ 34863627 (-) | True | LOC120568778 |
| XM_039814712.1 | mRNA | downstream | 66651 | 34849309 ~ 34850649 (-) | True | LOC120567735 |
| XM_039816668.1 | mRNA | downstream | 82910 | 34827113 ~ 34834390 (-) | True | LOC120568916 |
| XM_039816720.1 | mRNA | upstream | 6531 | 34924066 ~ 34925378 (-) | True | LOC120568955 |
| XM_039814673.1 | mRNA | upstream | 94817 | 35012352 ~ 35014245 (-) | True | LOC120567704 |
| XM_039815867.1 | mRNA | upstream | 141246 | 35058781 ~ 35069748 (-) | True | LOC120568374 |
| XM_039814675.1 | mRNA | upstream | 244274 | 35161809 ~ 35162981 (-) | True | LOC120567705 |
| XM_039816997.1 | mRNA | upstream | 251603 | 35169138 ~ 35172013 (-) | True | LOC120569118 |
| TU162119 | other | downstream | 21387 | 34895579 ~ 34895913 (-) | True | G120390 |
| unassigned_transcript_566 | other | downstream | 148786 | 34768441 ~ 34768514 (-) | True | trnan-guu_9 |
| TU161906 | other | downstream | 513287 | 34400823 ~ 34404013 (-) | False | G120230 |
| TU161838 | other | downstream | 688250 | 34228626 ~ 34229050 (-) | True | G120168 |
| unassigned_transcript_565 | other | downstream | 732212 | 34185016 ~ 34185088 (-) | True | trnak-cuu_2 |
| TU162164 | other | upstream | 94873 | 35012408 ~ 35014214 (-) | False | LOC120567704 |
| TU162546 | other | upstream | 1793675 | 36711210 ~ 36737250 (-) | False | LOC120567714 |
| unassigned_transcript_582 | other | upstream | 2082282 | 36999817 ~ 36999899 (-) | True | trnal-uaa_10 |
| unassigned_transcript_583 | other | upstream | 2086425 | 37003960 ~ 37004042 (-) | True | trnal-caa_5 |
| unassigned_transcript_584 | other | upstream | 2087066 | 37004601 ~ 37004683 (-) | True | trnal-uaa_11 |
