Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU162125 |
| length | 610 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 2 |
| gene id | LOC120568917 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 34953325 ~ 34954407 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU162122 | lncRNA | upstream | 47935 | 34905146 ~ 34905390 (+) | True | G120393 |
| TU162120 | lncRNA | upstream | 56192 | 34896535 ~ 34897133 (+) | True | G120391 |
| XR_005640792.1 | lncRNA | upstream | 155478 | 34792758 ~ 34797847 (+) | True | LOC120568810 |
| XR_005640791.1 | lncRNA | upstream | 181648 | 34768101 ~ 34771677 (+) | True | LOC120568809 |
| TU162009 | lncRNA | upstream | 288111 | 34645692 ~ 34665214 (+) | False | pde4ca |
| TU162127 | lncRNA | downstream | 10739 | 34965146 ~ 34965540 (+) | True | G120397 |
| TU162141 | lncRNA | downstream | 51187 | 35005594 ~ 35005806 (+) | True | G120410 |
| TU162142 | lncRNA | downstream | 55774 | 35010181 ~ 35011042 (+) | True | G120411 |
| TU162223 | lncRNA | downstream | 250705 | 35205112 ~ 35205709 (+) | True | G120483 |
| TU162237 | lncRNA | downstream | 365514 | 35319921 ~ 35320221 (+) | True | G120497 |
| XM_039816523.1 | mRNA | upstream | 128504 | 34809892 ~ 34824821 (+) | False | LOC120568812 |
| XM_039816521.1 | mRNA | upstream | 128504 | 34816450 ~ 34824821 (+) | True | LOC120568812 |
| XM_039816516.1 | mRNA | upstream | 186994 | 34743728 ~ 34766331 (+) | False | LOC120568807 |
| XM_039816995.1 | mRNA | downstream | 211251 | 35165658 ~ 35168716 (+) | False | LOC120569116 |
| XM_039816996.1 | mRNA | downstream | 211740 | 35166147 ~ 35168716 (+) | True | LOC120569116 |
| XM_039814983.1 | mRNA | downstream | 307151 | 35261558 ~ 35262902 (+) | True | LOC120567912 |
| XM_039814677.1 | mRNA | downstream | 477272 | 35431679 ~ 35443813 (+) | True | LOC120567707 |
| XM_039816699.1 | mRNA | downstream | 640471 | 35594878 ~ 35642033 (+) | True | LOC120568940 |
| unassigned_transcript_569 | other | upstream | 177176 | 34776078 ~ 34776149 (+) | True | trnam-cau_26 |
| unassigned_transcript_568 | other | upstream | 181104 | 34772150 ~ 34772221 (+) | True | trnam-cau_25 |
| unassigned_transcript_567 | other | upstream | 181179 | 34772074 ~ 34772146 (+) | True | trnar-ccu_3 |
| TU161934 | other | upstream | 495714 | 34453722 ~ 34457611 (+) | True | G120249 |
| TU161901 | other | upstream | 549324 | 34400801 ~ 34404001 (+) | False | rps28 |
| XR_005640811.1 | other | downstream | 648981 | 35603388 ~ 35609359 (+) | False | LOC120568940 |
| unassigned_transcript_570 | other | downstream | 1273417 | 36227824 ~ 36227906 (+) | True | trnal-uaa_3 |
| unassigned_transcript_571 | other | downstream | 1274048 | 36228455 ~ 36228537 (+) | True | trnal-uaa_4 |
| unassigned_transcript_572 | other | downstream | 1274646 | 36229053 ~ 36229135 (+) | True | trnal-caa |
| unassigned_transcript_573 | other | downstream | 1280676 | 36235083 ~ 36235153 (+) | True | trnal-uaa_5 |
