RNA id: TU162660


Basic Information

Item Value
RNA id TU162660
length 310
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G120860
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 37136359 ~ 37136750 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGTGAAGGGTTAGCTGCTCTGTGGTCTCTCTCTCCAGCGTGTGAAGGGTTAGCtgctctgtgctctctctctccagcatGTGAAGGGTTAGCTGCTctgtgctctctctctccagcatGTGAAGGGTTAGCTGCTCTGTGGTCTCTCTCTCCAGCATGTGAAGGGTTAGCtgctctgtgctctctctctccagcatGTGAAGGGTTAGCTGCTctgtggtctctctctctccagcatGTGAAGGGTTAGCtgctctgtgctctctctctccagcatGTGAAGGGTTAGCtgctctgtgctctctctctcc

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU162641 lncRNA upstream 45478 37089450 ~ 37090881 (+) True G120842
TU162630 lncRNA upstream 164921 36959931 ~ 36971438 (+) False LOC120568208
XR_005640684.1 lncRNA upstream 260965 36871351 ~ 36875394 (+) True LOC120568213
XR_005640683.1 lncRNA upstream 270219 36863799 ~ 36866140 (+) True LOC120568212
TU162604 lncRNA upstream 270830 36863793 ~ 36865529 (+) False LOC120568212
TU162670 lncRNA downstream 28098 37164848 ~ 37214610 (+) True G120868
TU162676 lncRNA downstream 63205 37199955 ~ 37200583 (+) True G120872
TU162681 lncRNA downstream 109488 37246238 ~ 37247868 (+) True G120875
TU162725 lncRNA downstream 158158 37294908 ~ 37297045 (+) True G120910
TU162729 lncRNA downstream 168144 37304894 ~ 37306014 (+) False G120914
XM_039815567.1 mRNA upstream 48916 36879918 ~ 37087443 (+) True LOC120568208
XM_039815569.1 mRNA upstream 280516 36855196 ~ 36855843 (+) True LOC120568211
XM_039815568.1 mRNA upstream 291709 36844011 ~ 36844650 (+) True LOC120568209
XM_039816078.1 mRNA upstream 388691 36737148 ~ 36747668 (+) True LOC120568506
XM_039816077.1 mRNA upstream 425547 36687706 ~ 36710812 (+) False LOC120568504
XM_039815045.1 mRNA downstream 72555 37209305 ~ 37230711 (+) True LOC120567940
XM_039814685.1 mRNA downstream 461064 37597814 ~ 37598425 (+) True LOC120567716
XM_039815841.1 mRNA downstream 852815 37989565 ~ 38019068 (+) True LOC120568367
XM_039815840.1 mRNA downstream 875016 38011766 ~ 38019068 (+) False LOC120568367
XM_039816922.1 mRNA downstream 902331 38039081 ~ 38098246 (+) True LOC120569077
TU162632 other upstream 117569 37010999 ~ 37018790 (+) False LOC120568208
TU162480 other upstream 729670 36406121 ~ 36406689 (+) True G120717
TU162479 other upstream 730586 36405240 ~ 36405773 (+) True G120716
unassigned_transcript_581 other upstream 886832 36249445 ~ 36249527 (+) True trnal-caa_4
unassigned_transcript_580 other upstream 893755 36242522 ~ 36242604 (+) True trnal-uaa_9
TU162730 other downstream 166144 37302894 ~ 37306014 (+) True G120914
TU162816 other downstream 875127 38011877 ~ 38019038 (+) False LOC120568367
unassigned_transcript_597 other downstream 1060291 38197041 ~ 38197122 (+) True trnas-cga_7
TU162901 other downstream 1618934 38755684 ~ 38755931 (+) True G121058
TU163034 other downstream 2255222 39391972 ~ 39392776 (+) True G121171

Expression Profile