RNA id: XM_039814692.1


Basic Information

Item Value
RNA id XM_039814692.1
length 2414
RNA type mRNA
GC content 0.50
exon number 15
gene id kcnab1b
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26073371 ~ 26115398 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACTGCAGTTCTTCCAGCCAGTCAGTCAGAGCCAGTAGCCTAtacacactgtctctctctctctctctcattcagcGCCTGGCTCACTCATTCTACGCTCAACACGCGCTGCTCCTCGCCTCCTCACTGCATCTGTTCTCTTCTCCCTGAAGTGAGGTACCATGCATCCCgctttctcctccttctcctctccgcTTGTCTGTTACCATTCCAGGGTCCCTTTATCAAACAGAGTGTTCTTGCTGCAAAGCCGGGGACCATAAAAGCTGTGTTACTTGCTCGAGGACTTTGGAGACGGGACAAGGCTGCTTGCCGGGTCTGAGGACAGCTACCGGAAACGCTGCTGCTGTTGCCGCTTTCTGTTGGGATGCAGATCTTTGCGGGGCCTGTGCTTGCTGTGTAACACCGCTTGATTCCTCTCAAAGGTGCAGGAGGGCACACGTCAATCAAGAATCTCATCCTTGGTTCTCAGAGAACGCTGAGAACTCATTGTGGAGTCAGACCGTCACAGAATCACCGTCTCAACTCCTCATACACTGACCAGGACTGCCCTGCTGCTATGTTTGATCTTGATGTGACATTGGCTTGAGATTCGtctcctaaaaaaaacaaaaactgaatgatCTCATGCCCCCATCATTCCTGCCTTTGATTTCCATATGAGATTCAGCAGCACCAGGCAGAACTGGCCTGGACCATTGACTTTCAACTTTACATTAGAACAACAAGGACAGCATCTAAGTTCCACGGACTGTTAGGTATTTTTAAAGACAGAAATACAGCCTTGTTTGTCTTGGAGCAGCTCTAGTGGCATTTGCCAACAGCCATGCAGGTTTCCTTTGCATGCACGGACCACGGGCTGAAGGCCCCGCGTAACGGCGAGCACAGCAAGCAGAACGCCACCAGCCCCAACACAACCAGCCAGGCCCGCGCCCGCTTCCGCACCGTGGCCCTGATAGCACGCAGCCTGGGCTCCTTCACCCACCGCTACCACCACAACCTCAAGGAGTCCACCGGCAAGCTCACCGGCATGAAGTACCGGAACCTGGGGAAATCTGGGTTGCGTGTCTCCTGTCTGGGGCTCGGCACATGGGTAACATTTGGAGGTCAGATCTCTGATGAGGTGGCAGAGCAGCTGATGACTATCGCGTATGAGAGTGGGGTCAACCTGTTCGACACGGCTGAAGTCTACTCCGGGGGGAAagcAGAGATAATCCTGGGAAACATCATCAAGAAAAAGTGCTGGAGGAGATCCAGCCTGGTGATCACCACAAAGCTCTACTGGGGAGgaaaagcagagacagagagagggctCAACAGAAAGCACATCATTGAAGGTTTAAGGGGCTCCCTCCAGAGGATGCAACTTGAGTATGTGGATGTGGTTTTTGCCAACCGGCCAGACAGCAACACTCCCATGGAGGagaTAGTGAGAGCAATGACACATGTGATCAACCAGGGGATGTCTATGTATTGGGGGACATCCAGGTGGTCTGCCATGGAGATCATGGAAGCATACTCTGTGGCCAGACAGTTTAATCTAATTCCACCAGTGTGTGAGCAGGCAGAGTATCACTTCTTCCAGAGGGATAAAGTGGAAACTCAGCTGCCAGAGCTCTACCATAAGATAGGTGTGGGTGTGGTATCTTGGTCACCTTTGGCCTGTGGAATCATCACTGGGAAGTACGAGAACGGCATCCCAGAATCCTCCAGGGCCTCAATGAAGCCATACCAGTGGCTGAGGGAGAAAGTAACGAGTGAGGATGGGAGAAAACAACAAGCCAAGCTAAAGGAACTGGCTCACATCGCGGAGAAGCTTAGTTGTACTATGCCGCAGCTAGCCATAGCCTGGTGCCTGAGGAACGAGGGAGTCAGCTCAGTGCTGCTGGGATCCTCCAATCCGAGCCAGTTAACAGAGAATCTGGGAGCCATTCAGGTAATTCCAAAGATGACAGCAGGTATTGCTTCAGAAGTGGATCATATACTGGGAAATCGTCCTCACAGCAAAAAGGACTACCACCATTAGGATGCACCCTGTTTTAGTGAACTATGCTTGAAAAAGCTTATCAAAGCTCAATTCTCACAGCCATGGCACCATAGCGCGTGCCCAACTTTGCTTGTGTGCGCGTATGGCGTGTATGTGTGACTGTGTAAAGTGTTCTGCTTGGCTTCTTGTCTGTATGAAGATCAACCAGTACTCATTCTGAAGTGAGTTACTTGACAAAACATGCATGCTATAGCTATAGCAGCCAGCCACTGGACTGAACAACAGTTAGAAGATCCAGTGAGATGATTTCTGGAGCGAAATTCTCTTGCACTCCAACAAGCTGTTGAACCACAAATATTAAGTAACAAAATATTAGATTATGGAGGAATAGATTACTGCACAATTAAACTCAAGCTGATTGACAACTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU158959 lncRNA upstream 12797 26058254 ~ 26065839 (+) True G117917
TU158861 lncRNA upstream 27758 26050135 ~ 26050878 (+) False LOC120567655
TU158843 lncRNA upstream 161914 25916500 ~ 25916722 (+) True G117847
TU158842 lncRNA upstream 172320 25906115 ~ 25906316 (+) True G117846
TU158841 lncRNA upstream 173505 25904913 ~ 25905131 (+) True G117845
TU158981 lncRNA downstream 89213 26204611 ~ 26204830 (+) True G117933
TU158986 lncRNA downstream 92958 26208356 ~ 26208871 (+) True G117938
TU158990 lncRNA downstream 191291 26306689 ~ 26307634 (+) False ece2a
TU159066 lncRNA downstream 198867 26314265 ~ 26314630 (+) True G118009
TU159119 lncRNA downstream 306056 26421454 ~ 26496802 (+) False wdr47a
XM_039814613.1 mRNA upstream 27537 26048789 ~ 26051099 (+) True LOC120567655
XM_039814610.1 mRNA upstream 32467 26016351 ~ 26046169 (+) False LOC120567653
XM_039814687.1 mRNA downstream 534 26115932 ~ 26130177 (+) True pask
XM_039814689.1 mRNA downstream 3328 26118726 ~ 26130177 (+) False pask
XM_039814699.1 mRNA downstream 15805 26131203 ~ 26134522 (+) True mterf4
XM_039814701.1 mRNA downstream 19738 26135136 ~ 26139505 (+) True LOC120567725
XM_039814697.1 mRNA downstream 24263 26139661 ~ 26163512 (+) True klhl24a
TU158825 other upstream 247941 25830055 ~ 25830695 (+) True G117829
TU158814 other upstream 284682 25775891 ~ 25793954 (+) False LOC120568895
TU158802 other upstream 322746 25755093 ~ 25755890 (+) False LOC120568894
TU158583 other upstream 1124389 24950568 ~ 24954247 (+) True G117664
TU158471 other upstream 1402883 24673924 ~ 24675753 (+) False LOC120569045
TU158989 other downstream 100329 26215727 ~ 26217041 (+) True LOC120568800
TU159070 other downstream 280028 26395426 ~ 26402078 (+) True G118011
TU159071 other downstream 284022 26399420 ~ 26402078 (+) False G118011
TU159113 other downstream 301110 26416508 ~ 26418008 (+) True ccl20a.3
TU159178 other downstream 475432 26590830 ~ 26600072 (+) True prkab2

Expression Profile