Item | Value |
---|---|
RNA id | XM_039815360.1 |
length | 2853 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 9 |
gene id | agap3 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_053122.1 |
NCBI id | CM020919.1 |
chromosome length | 39550354 |
location | 21449437 ~ 21571620 (-) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | name | namespace |
---|---|---|
GO:0043547 | positive regulation of GTPase activity | biological_process |
GO:0005622 | intracellular anatomical structure | cellular_component |
GO:0005525 | GTP binding | molecular_function |
GO:0008270 | zinc ion binding | molecular_function |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU157296 | lncRNA | downstream | 196058 | 21297415 ~ 21300082 (-) | True | G116692 |
TU157207 | lncRNA | downstream | 286367 | 21208742 ~ 21209773 (-) | True | G116651 |
TU157135 | lncRNA | downstream | 388422 | 21107514 ~ 21107718 (-) | True | G116582 |
TU157133 | lncRNA | downstream | 434900 | 21058592 ~ 21061240 (-) | True | G116580 |
TU157105 | lncRNA | downstream | 500600 | 20988324 ~ 20995540 (-) | True | tmie |
TU157354 | lncRNA | upstream | 21119 | 21592739 ~ 21595306 (-) | True | G116743 |
TU157375 | lncRNA | upstream | 87059 | 21658679 ~ 21660467 (-) | True | G116758 |
TU157461 | lncRNA | upstream | 239242 | 21810862 ~ 21811146 (-) | True | G116832 |
TU157550 | lncRNA | upstream | 426174 | 21997794 ~ 22002858 (-) | True | G116893 |
TU157587 | lncRNA | upstream | 606673 | 22178293 ~ 22178534 (-) | True | G116922 |
XM_039816081.1 | mRNA | downstream | 173656 | 21303361 ~ 21322484 (-) | False | asic1c |
XM_039816080.1 | mRNA | downstream | 173656 | 21303361 ~ 21322484 (-) | True | asic1c |
XM_039816562.1 | mRNA | downstream | 211201 | 21273384 ~ 21284939 (-) | True | atg9b |
XM_039816561.1 | mRNA | downstream | 211201 | 21274741 ~ 21284939 (-) | False | atg9b |
XM_039816564.1 | mRNA | downstream | 227764 | 21213666 ~ 21268376 (-) | True | LOC120568841 |
XM_039816670.1 | mRNA | upstream | 95119 | 21666739 ~ 21704105 (-) | True | sntg1 |
XM_039816673.1 | mRNA | upstream | 195501 | 21767121 ~ 21783891 (-) | True | ube2v2 |
XM_039816674.1 | mRNA | upstream | 195501 | 21767121 ~ 21783697 (-) | False | ube2v2 |
XM_039816752.1 | mRNA | upstream | 213679 | 21785299 ~ 21794603 (-) | True | mcm4 |
XM_039816222.1 | mRNA | upstream | 227336 | 21798956 ~ 21833615 (-) | True | spidr |
TU157096 | other | downstream | 485571 | 21008049 ~ 21010569 (-) | False | higd1a |
TU156767 | other | downstream | 1700431 | 19793834 ~ 19795709 (-) | False | xcr1b.1 |
TU156578 | other | downstream | 2030760 | 19464700 ~ 19465380 (-) | True | G116138 |
TU156517 | other | downstream | 2273414 | 19221791 ~ 19222726 (-) | True | G116084 |
TU156358 | other | downstream | 2560663 | 18931974 ~ 18935477 (-) | True | LOC120568972 |
TU157655 | other | upstream | 690378 | 22261998 ~ 22263498 (-) | False | G116969 |
TU157659 | other | upstream | 691503 | 22263123 ~ 22268559 (-) | True | G116969 |
TU158039 | other | upstream | 1858746 | 23430366 ~ 23430992 (-) | True | G117259 |
XR_005640657.1 | other | upstream | 1897000 | 23468620 ~ 23491612 (-) | False | LOC120568062 |
unassigned_transcript_560 | other | upstream | 2296332 | 23867952 ~ 23868025 (-) | True | trnai-aau_23 |