RNA id: XM_039815582.1


Basic Information

Item Value
RNA id XM_039815582.1
length 2532
RNA type mRNA
GC content 0.47
exon number 22
gene id kif2c
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24853794 ~ 24861945 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGGACCAATCAGATCCTTCAGTACCCGGAACACCAGTTTCAAACTTTGGCGGCGTTGAAATTGGCATGTATGCTAGGTAAAAGTTTGGTTTTGACGTTAGTTGgtgagaaaacacaaacaaggtTATTAGTTGACTTGTCGACGAAAAGGTGAAATAGTTTTAAAGCGACCACGGCAAACTTGCTAGGTAGCGCGAGTTAATCAAACGTTAGCTCGTTTTCAaaagtttagctagctaacgttaccgggattTTAATTTCTCCGTTAACGttacagcacaaaaaaaaagaagctacaaTGGAGACCAGCCTTTCCAGGCTTCTTGTTGGACTCTCTGTAAAAATCAGTCGCAGTGATGGTCGAGTACATATGGCAACAGTGAAGTCCACGGATACCGTCAAGTCTACGGTTATGGTTGAATGGAGTGAAAGAAAGATCTGCCGAGGAAAGGAGGTTGATTTGACTGAGTTATGTACACTCAATCCAGAGCTTTTGGACCATATAAAGACTGTCACAAAGCCCACTTCTGACCCAGCCCCTCTTGCTCCAGACAAGAAGTATGAGGGTCGACTGCGCTCATCCAGAATTCCTGCCCCTCCCTCCTCCTCTGCTCCACCAGTCACCATAGCTGAAGAGTCAGTTGCCAATCGGTCTCAGACTAGGCAGACGTGTTCGTTCCAGGCCCCGGCCCCTGTTCCAGCATCAGTCCCAACCTCCGAATCTTCTCAGGCAAACTTGGAGACGGTCCACCCTAATCTCCCCTCTTCATCATCACTCCTCACAAACTCTGCACTTCATAATCAGCACCATAGAAAGAATGAGCCCAAACCAGCACAGTCACTTCATTTTGTCCGTGAGGCAATAAAGgaaaatgaacctgagataaTGCCTCCTCCATCTTCAGTCAAAGGCAAAAGAAAATCGGTGGTTTCTAAAGAGCTAAACAAAGGTAACAAAAGGCTGTCTTGTGTTGTAAAGCCCCCCGACATGCAGACCAAGAGAGGAAAGTTTGGAGAGGCTCCCCGACCAAACCAGAAGTTCTATGAGATGATCCAAGACTTCAGAGAGACCTTGGAAATAAACCCCTTATCAACAAATGAGCACATTGAACCTCACAggatctgtgtgtgcgtgcgcaagCGCCCCCTTAACAAACAAGAGACTAATAAAAAGGAGATCGATGTGGTGTCTGTACCTGGAAAAGGTACTCTGCTTGTCCATGAGCCAAAACAGAAGGTGGACCTCACCAAGTACTTGGAGAACCAAACGTTCCACTTTGACTACTCCTTTAATGAGACCGCCACCAACGACCTGGTCTACAAgTTCACAGCCAAACCGTTAGTGCATTCCATTTTTGAAGGTGGAATGGCAACATGTTTCGCCTACGGCCAGACTGGAAGTGGGAAGACTCATACTATGGGAGGTGATTTCACAGGGAGGCAGCAGAACAGCGCTAAAGGAATCTACGCCTTGGCAGCCCAGGATGTTTTCGCCTATCTGAACCACCGGAGATATGCAAACCTGGACCTCTCTGCTTATGTCAGCTTCTTTGAGATTTACAATGGAAaaGTGTATGACCTCCTGAATAAGAAGGCCAAGCTCCGTGTTCTGGAGGACGACAGACAGCAAGTTCAGGTGGTTGGCCTGGAGGAGGTCTATGTGTCCAGCGCAGAAGAGGTCATCAAGATGATCCAGCAGGGCAGTGCATGCAGAACATCAGGCCAGACCTCTGCCAACGCCAACTCATCCCGCTCTCATGCCATTCTTCAGATCGCCCTGCGGCGCAACGACCGTGCCACCACGCTGCATGGCAAATTCTCACTGATTGACTTGGCTGGCAATGAGCGCGGCACTGACGTCAGTAGCAATGACCGCGCCACTTTAGTGGAGACTGCTGAGATCAACCGCAGCCTGCTGGCTCTCAAGGAGTGTATTCGCTCACTGGGAATGAACAGCGATCACATTCCTTTCCGAATGAGCACATTGACCAAAGTCCTCAGGGACTCCTTCGTTGGAGAAAAGTCCAAGACGTGCATGATTGCTATGGTGTCTCCAGGCATGACTTCATGTGAATACACGATGAACACACTACGTTATGCGGACAGAGTGAAAGAACTGAATGGCAAATCCAAGATCACCAGAGAAGCTAAGGCACAAGAGCCTATAAATAGCTCCACAGAGGAGGAATCTGTTGTGGATACCAGTGTATATGATGCCATATCGCAAgtggcagagctggaggagaaggtttttgtacagtttCAGAGGGCCAATGAACACATCAATGCAATGAGCCAAACCTCTTACAATGTTGTGGAAGGACTCCCCGACCTGGTGGATTATGCAAAGAAATTAATGGACACATTACAGACTTTGCAGACTGCTGTGGAAAAAGAGAGCATGGCAAGGCAAAGCTACTGAGAAGAACCCACCAACTTGCTCACAAAGTGTGTTTAttaaaaatgtctgtttttaagCAGTTtgatttcaatgtttttaacaactgtattaaataaatgtattgagACACTA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10393 KIF2_24, MCAK; kinesin family member 2/24

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU158539 lncRNA upstream 15565 24837956 ~ 24838229 (+) True G117632
TU158430 lncRNA upstream 277792 24569578 ~ 24576002 (+) False LOC120568789
TU158431 lncRNA upstream 297137 24556419 ~ 24556657 (+) True G117547
XR_005640665.1 lncRNA upstream 514538 24337693 ~ 24339256 (+) True LOC120568139
TU158403 lncRNA upstream 594963 24257554 ~ 24258831 (+) True G117523
TU158548 lncRNA downstream 1082 24863027 ~ 24870087 (+) True selenot1a
TU158596 lncRNA downstream 125554 24987499 ~ 25043945 (+) False fgf12a
TU158635 lncRNA downstream 256286 25118231 ~ 25118502 (+) True G117704
XR_005640686.1 lncRNA downstream 263886 25125831 ~ 25130929 (+) True LOC120568228
TU158801 lncRNA downstream 887490 25749435 ~ 25749788 (+) False LOC120568894
XM_039816633.1 mRNA upstream 16100 24808244 ~ 24837694 (+) True ptch2
XM_039816559.1 mRNA upstream 56546 24759165 ~ 24797248 (+) True eif2b3
XM_039816487.1 mRNA upstream 168215 24676983 ~ 24685579 (+) True plk3
XM_039816862.1 mRNA upstream 178040 24667879 ~ 24675754 (+) True LOC120569045
XM_039814561.1 mRNA upstream 191730 24660132 ~ 24662064 (+) True mrps14
XM_039815588.1 mRNA downstream 1051 24862996 ~ 24869415 (+) False selenot1a
XM_039815587.1 mRNA downstream 13056 24875001 ~ 24876959 (+) True LOC120568223
XM_039815585.1 mRNA downstream 25816 24887761 ~ 24892439 (+) False LOC120568221
XM_039815584.1 mRNA downstream 25821 24887766 ~ 24892439 (+) True LOC120568221
XM_039816771.1 mRNA downstream 32610 24894555 ~ 24906946 (+) True zgc:153615
TU158470 other upstream 178041 24667893 ~ 24675753 (+) False LOC120569045
TU158471 other upstream 178041 24673924 ~ 24675753 (+) False LOC120569045
XR_005640839.1 other upstream 799090 24049764 ~ 24054704 (+) False LOC120569114
XR_005640838.1 other upstream 799090 24049764 ~ 24054704 (+) False LOC120569114
TU158239 other upstream 830135 24022441 ~ 24023659 (+) True G117400
TU158583 other downstream 88623 24950568 ~ 24954247 (+) True G117664
TU158802 other downstream 893148 25755093 ~ 25755890 (+) False LOC120568894
TU158814 other downstream 913946 25775891 ~ 25793954 (+) False LOC120568895
TU158825 other downstream 968110 25830055 ~ 25830695 (+) True G117829
TU158989 other downstream 1353782 26215727 ~ 26217041 (+) True LOC120568800

Expression Profile