Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039815621.1 |
| length | 1321 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | LOC120568240 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 35791949 ~ 35809067 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0003824 | catalytic activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640689.1 | lncRNA | downstream | 13525 | 35771059 ~ 35778424 (-) | True | LOC120568239 |
| XR_005640688.1 | lncRNA | downstream | 50595 | 35739683 ~ 35741354 (-) | False | LOC120568238 |
| XR_005640687.1 | lncRNA | downstream | 50595 | 35739683 ~ 35741354 (-) | True | LOC120568238 |
| TU162309 | lncRNA | downstream | 100733 | 35685487 ~ 35691216 (-) | True | G120559 |
| XR_005640812.1 | lncRNA | downstream | 138618 | 35650694 ~ 35653331 (-) | True | LOC120568941 |
| XR_005640691.1 | lncRNA | upstream | 30794 | 35839861 ~ 35843853 (-) | True | LOC120568243 |
| TU162376 | lncRNA | upstream | 89186 | 35898253 ~ 35898958 (-) | True | G120617 |
| TU162382 | lncRNA | upstream | 93894 | 35902961 ~ 35903223 (-) | True | G120623 |
| TU162391 | lncRNA | upstream | 109812 | 35918879 ~ 35919159 (-) | True | G120631 |
| TU162424 | lncRNA | upstream | 238397 | 36047464 ~ 36047706 (-) | True | G120664 |
| XM_039815620.1 | mRNA | downstream | 69030 | 35719998 ~ 35722919 (-) | False | LOC120568237 |
| XM_039815618.1 | mRNA | downstream | 69030 | 35719998 ~ 35722919 (-) | True | LOC120568237 |
| XM_039815617.1 | mRNA | downstream | 69565 | 35719998 ~ 35722384 (-) | False | LOC120568237 |
| XM_039814678.1 | mRNA | downstream | 333744 | 35456865 ~ 35458205 (-) | True | LOC120567708 |
| XM_039816650.1 | mRNA | downstream | 346369 | 35444236 ~ 35445580 (-) | True | LOC120568905 |
| XM_039815623.1 | mRNA | upstream | 17883 | 35826950 ~ 35836030 (-) | True | tyw3 |
| XM_039816629.1 | mRNA | upstream | 102520 | 35911587 ~ 35914279 (-) | True | LOC120568882 |
| XM_039816952.1 | mRNA | upstream | 119563 | 35928630 ~ 35933752 (-) | False | LOC120569092 |
| XM_039816951.1 | mRNA | upstream | 119563 | 35928630 ~ 35933214 (-) | True | LOC120569092 |
| XM_039814679.1 | mRNA | upstream | 153524 | 35962591 ~ 35964054 (-) | True | LOC120567710 |
| TU162164 | other | downstream | 777735 | 35012408 ~ 35014214 (-) | False | LOC120567704 |
| TU162119 | other | downstream | 896036 | 34895579 ~ 34895913 (-) | True | G120390 |
| unassigned_transcript_566 | other | downstream | 1023435 | 34768441 ~ 34768514 (-) | True | trnan-guu_9 |
| TU161906 | other | downstream | 1387936 | 34400823 ~ 34404013 (-) | False | G120230 |
| TU161838 | other | downstream | 1562899 | 34228626 ~ 34229050 (-) | True | G120168 |
| TU162546 | other | upstream | 902143 | 36711210 ~ 36737250 (-) | False | LOC120567714 |
| unassigned_transcript_582 | other | upstream | 1190750 | 36999817 ~ 36999899 (-) | True | trnal-uaa_10 |
| unassigned_transcript_583 | other | upstream | 1194893 | 37003960 ~ 37004042 (-) | True | trnal-caa_5 |
| unassigned_transcript_584 | other | upstream | 1195534 | 37004601 ~ 37004683 (-) | True | trnal-uaa_11 |
| unassigned_transcript_585 | other | upstream | 1229444 | 37038511 ~ 37038593 (-) | True | trnal-caa_6 |
