RNA id: XM_039815640.1


Basic Information

Item Value
RNA id XM_039815640.1
length 1631
RNA type mRNA
GC content 0.50
exon number 9
gene id tmem68
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 8202224 ~ 8212592 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GGCACACCTGTGTGTAGTGTCACACTGAAAGCGTTCCCCGGCTAGGGTTAGGTTAGTTAGAAACACGGCAgttgttagctaacgttacgtaatTGTATGTTGTGCTAGTGTAACATTAAATATACAGTGGCGTGTTTTTGATGGTTCTGTTCACACAGGGACTGTTTGAGTTCACCTGTGTGGATGCCGATGCTCTCCATGTAGTGTGTTTCTTCCCCTCGAGGCTGTCATCAGCTTCTGTGGCTGACAGCAGAGCAGGATGTCAGACAGTGGGAACCAGTCCTGTCTGATGGGAGCAGAGGACACCGTCTCCTTCCTGgtgtgtgtgtttcatgcaGTGGAGGAATGGGCAGGCCTTGGGCAGTTGGAGGACTATCTGAGTGTTTTGGAGTATCTGCTGTGGGTCTTCACCCCTCTGGCCGTCGTCTTCATCCTGCCCTTCCTCAtcgtcatcctcatttacctcTCTATACTCTTCCTTCATGTCTACAAGAGGAAGAATCAGCTGAGGGAAGCTTACTGCAACAACCTGTGGGATGGAGCCAGGAAGACCCTGGCGACTCTGTGGGACGGACACGGAGCCATATGGCACGGTTATGAGATCCATGGGATGGAGAAGATCCCTGACAAAGGACCAGCACTGATAGTGTACTATCATGGAGCCATTCCCATTGACTACTATTACTTCCTGGCCAACGTTATCATCCAGAAGGGACGGCCCTGTCACTCTGTAGCTGACTACTTCCTCTTTAAGGTCCCAGGTTTCAAGTTACTGTTGGAGGTGTTCAGCGTGATCCACGGTCCTCAGGAAGAGTGTGTGCGGGCTCTGAGGAATGGTCACCTGTTGGGGATTTCTCCTGGAGGAGTGCGGGAGGCTCTGTTCAGTGATGAGACCTACCCTCTTCTCTGGGGCAAACGCAAAGGCTTCGCCCAGGTCGCCATCGACGCTCAAGTGCCAATAATTCCGATGTTTACTCAGAATCTGCGGGAAGGCTTCAGATCTCTGGGAACACTCAgatTTTTCCGCTGGATGTACGAGAGGTTTCGCCTCCCTGTAGCTCCTGTTTACGGTGGATTTCCTGTGAAGTTCCGCACCTTCCTCGGTGATCCCATCCCGTATGACCCCAACATAAACGCTGCAGAGCTGGCAGAGAAGGTGCAGCAGGCAGTTCAGTCTCTGATAGACCAGCACCAGCAGATCCCAGGGAACATCCTGAGAGCCTTGTTGGAGAGatttcacaccacacacaaagacCACTGACACTGCAGCAGTTCAGCAACAGAGACAGACTACCCAGTGTGTGAGCAAAACAACGCGTCCCATCGGCTCAGACGGCTACAGTGTGCACAGGTTTGGTTGGCCTAACATGTTGGAACATTTGCACAGCTTTCTTCACCGCTGCCAAACAACACCGACTGCAGCTGCTGAGCTCCTTGTTACATGTCATTTGTATCGCACGTTTCTGATTTGTTTCCATGCGTTCATTgactccctttttcatctgatgAACTCTTTAAAGCTATACTTCCTGAAGTTGTGATATTGGACTCGACAATAAtcacacctaaaaaaaaaaaacgatgacTGCaaagataattatttttttaatacacaCGTGTACAATATCTAA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU152123 lncRNA upstream 10880 8190577 ~ 8191459 (+) True G112847
TU152081 lncRNA upstream 204795 7997161 ~ 7997544 (+) True G112813
TU152080 lncRNA upstream 215958 7986177 ~ 7986381 (+) True G112812
TU152079 lncRNA upstream 216831 7985293 ~ 7985508 (+) True G112811
TU152077 lncRNA upstream 224326 7977704 ~ 7978013 (+) True G112809
TU152134 lncRNA downstream 5654 8218246 ~ 8219062 (+) True G112855
TU152135 lncRNA downstream 11241 8223833 ~ 8231076 (+) True G112856
TU152142 lncRNA downstream 26433 8239025 ~ 8241419 (+) True G112862
TU152250 lncRNA downstream 114135 8326727 ~ 8327599 (+) True G112940
TU152251 lncRNA downstream 114135 8326727 ~ 8330287 (+) False G112940
XM_039816551.1 mRNA upstream 26385 8164406 ~ 8175954 (+) True blvra
XM_039816763.1 mRNA upstream 140239 8044004 ~ 8062100 (+) True cdc14aa
XM_039814951.1 mRNA upstream 301521 7885498 ~ 7900818 (+) False dnai4
XM_039816300.1 mRNA downstream 135767 8348359 ~ 8373438 (+) True gad3
XM_039815646.1 mRNA downstream 194337 8406929 ~ 8510408 (+) True LOC120568257
XM_039815645.1 mRNA downstream 194337 8406929 ~ 8510408 (+) False LOC120568257
XM_039815647.1 mRNA downstream 194337 8406929 ~ 8510408 (+) False LOC120568257
XM_039815648.1 mRNA downstream 194337 8406929 ~ 8510408 (+) False LOC120568257
XR_005640625.1 other upstream 300052 7885498 ~ 7902287 (+) True dnai4
TU151912 other upstream 1166639 7035027 ~ 7035700 (+) True G112670
TU151896 other upstream 1193182 7007242 ~ 7009157 (+) True G112655
TU151756 other upstream 1431427 6741101 ~ 6770912 (+) True G112562
TU151740 other upstream 1601959 6577407 ~ 6600380 (+) False LOC120568552
TU152240 other downstream 97258 8309850 ~ 8313076 (+) True G112932
TU152286 other downstream 194348 8406940 ~ 8454416 (+) False LOC120568257
TU152347 other downstream 496737 8709329 ~ 8712997 (+) False atg10
TU152348 other downstream 496737 8709329 ~ 8712997 (+) False atg10
TU152352 other downstream 500673 8713265 ~ 8715271 (+) False atg10

Expression Profile