Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039815674.1 |
| length | 788 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 5 |
| gene id | LOC120568280 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 8150224 ~ 8158788 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | description |
|---|---|
| K18173 | COA1; cytochrome c oxidase assembly factor 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152206 | lncRNA | downstream | 90191 | 8056602 ~ 8060033 (-) | True | G112903 |
| TU152205 | lncRNA | downstream | 104743 | 8044110 ~ 8045481 (-) | True | G112902 |
| TU152161 | lncRNA | downstream | 180890 | 7967433 ~ 7969334 (-) | True | G112876 |
| TU152162 | lncRNA | downstream | 183919 | 7964439 ~ 7966305 (-) | True | G112877 |
| TU152172 | lncRNA | downstream | 224032 | 7924102 ~ 7926192 (-) | True | G112887 |
| TU152230 | lncRNA | upstream | 52039 | 8210827 ~ 8211057 (-) | True | G112922 |
| TU152232 | lncRNA | upstream | 53332 | 8212120 ~ 8212771 (-) | True | G112924 |
| TU152231 | lncRNA | upstream | 57121 | 8215909 ~ 8219170 (-) | True | G112923 |
| TU152301 | lncRNA | upstream | 295703 | 8454491 ~ 8454705 (-) | True | G112980 |
| TU152305 | lncRNA | upstream | 338945 | 8497733 ~ 8497975 (-) | True | G112984 |
| XM_039815671.1 | mRNA | downstream | 3332 | 8140232 ~ 8146892 (-) | True | ccr12a |
| XM_039815672.1 | mRNA | downstream | 3333 | 8140232 ~ 8146891 (-) | False | ccr12a |
| XM_039815670.1 | mRNA | downstream | 13667 | 8103401 ~ 8136557 (-) | True | cntnap2b |
| XM_039814514.1 | mRNA | downstream | 64298 | 8079296 ~ 8085926 (-) | True | LOC120567605 |
| XM_039817008.1 | mRNA | downstream | 82775 | 8063083 ~ 8067449 (-) | True | tmem70 |
| XM_039816994.1 | mRNA | upstream | 19497 | 8178285 ~ 8187676 (-) | True | LOC120569115 |
| XM_039815638.1 | mRNA | upstream | 30615 | 8189403 ~ 8203101 (-) | True | tgs1 |
| XM_039815778.1 | mRNA | upstream | 73486 | 8232274 ~ 8249635 (-) | True | xkr4 |
| XM_039815779.1 | mRNA | upstream | 98864 | 8257652 ~ 8283049 (-) | False | LOC120568351 |
| XM_039815782.1 | mRNA | upstream | 98864 | 8257652 ~ 8283032 (-) | False | LOC120568351 |
| unassigned_transcript_534 | other | downstream | 1922440 | 6227703 ~ 6227784 (-) | True | trnas-uga_20 |
| unassigned_transcript_533 | other | downstream | 1923478 | 6226665 ~ 6226746 (-) | True | trnas-uga_19 |
| unassigned_transcript_532 | other | downstream | 1929127 | 6221016 ~ 6221097 (-) | True | trnas-uga_18 |
| unassigned_transcript_531 | other | downstream | 1929690 | 6220453 ~ 6220534 (-) | True | trnas-uga_17 |
| unassigned_transcript_530 | other | downstream | 1930270 | 6219873 ~ 6219954 (-) | True | trnas-uga_16 |
| unassigned_transcript_537 | other | upstream | 328679 | 8487467 ~ 8487539 (-) | True | trnak-uuu_16 |
| TU152428 | other | upstream | 621664 | 8780452 ~ 8790042 (-) | True | G113070 |
| unassigned_transcript_538 | other | upstream | 713646 | 8872434 ~ 8872505 (-) | True | trnag-ucc_9 |
| unassigned_transcript_540 | other | upstream | 714622 | 8873410 ~ 8873482 (-) | True | trnak-cuu_1 |
| unassigned_transcript_547 | other | upstream | 733143 | 8891931 ~ 8892004 (-) | True | trnan-guu_6 |
