RNA id: XM_039815732.1


Basic Information

Item Value
RNA id XM_039815732.1
length 2606
RNA type mRNA
GC content 0.41
exon number 11
gene id anxa13l
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13555585 ~ 13566467 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGCAGCACCGGACAGGGCTGCGTCCTTTTAGGAACAACCGACCCGACTTGACACGCATCACATCAACTACAGAGCAGCACAACGCAGCACAGCACAACGtcacaacacagcacagcatCACAACACGCAGATTTGATTTGTTACTATCTAACTGGAAAAAGCGGTCTGGAATAACATGGGCAACGTCCAGCCCACCATAGTCCCATGTGAGGACTTTGATGTCACAGCTGATATAAAGGCTATCAGAAAAGCATGTAAAGGTTTAGGCACAGATGAAGAGGCCATTATTCAGATCCTGGCCAACCGCTCTGCAGCTCAGCGTGTAGAGATCAAGCAGGCCTACTTTGAGAAGTATGATGATGAGTTAGAGGAGGTCCTAAAAAAGGAGCTGACAGGTAGTTTTGAGAAGGCCACCATTGCCATGTTGGAGCCTCCACATGTTTACTTCGCCAAGGAGCTGAGGAAGGCCATGAAGGGGGCAGGCACGGACGAAGCCGTGCTGGTAGAGATCCTGTGCACAGCCACCAATGAGGACATCTTGAGCTACAAGCAGACTTATGCCCAGGTGCATGAGCGTGAATTAGAGGCAGACATTGAGGATGACACCAGTGGAGACGTGAGGAACCTGCTGATGTCACTGCTGCAGGCGAGCAGAGACGAGGGCTATGAAGTGGATGAAGGTTTAGCCGAACAGGATGCCATATCTTTGTTTGAGGCAGGAGAAGGCAGATTTGGCACCGATGAGTCCACCTTCAACTTCATCCTGACACACAGAAACTACCTGCAGCTTCAGGCCACCTTTAAGATCTATGAGTCGCTTTCAGGAACAGACATTTTGGACACCATTGACTCTGAAGCAACAGGAACTCTGAAGGACTGCTACATTACTCTGGtCAGGTGTGCAAAGAACCCGCAGCTGTATTTTGCCCGACGCCTTAATGCCGCCATGAAGGGAGTGGGCACTGATGAAGACACGCTCATTCGCATCATTGTAGGCCGCTCTGAGTTTGACCTGGAGACAGTGAAGGACATGTACCTGGAGAAATACGACGTTACCCTGAAAGACGCTCTGGATTCAGAGTGTGGTGGAGACTTCAAACGCCTCCTCATCGAGATCCTGCACTAAAACATCTCCTTCTTCCTACAGGCCTTATTTAACCAACTTGACAGTCTCTGTATCCACTcatccttcctccttcctcctcttctttatACACCTTTTTACCAGTTTCACTCATTCACTTTGTGGACGTCTCTCTGACAGTCAGTTATCATTGCAGCATGGACCAAAAACCAAGtaattattatataatacatTGTTTTACACATGGCAAACTTACATTCACAGTCTTTAAATACACAGTTTTGCCAAGAACATTACACTCTCATACAATAGAGGTGCATTGGATGTTTGTTGTCCCTTTGACAATATAATGACAGCATTGTGGAACTTATATGGAACTTGTGCAGCTGAGCATCATTTATCTAAATAAATAGTGTTAGTCTATCACAATCAGCAGTCTTTTTGAATTTCGGCTGTAGTTCACCATTTCAAGTGTAACCCAAAGCTGTAAACATTGcgaggctgctgctgctcaacATAAACTATCTCTTATATTTGTCATCATACTCTTATCATCATCCGTTAACTTCACAACTATTTGCCTCAAAGATGCCTTTCATAAGATGATATGTCATTTCACTTTTGCTGCAACACTTAAGTGCCGAATTATcacatttaatatttgataacTGAATACACTAGATGATTaattatacataaatatatcatTACCCTGATACCAAAAGCCTAAACTCTTTAAGTATGCAGTATTGGGTTTTTCTAGTCACATCCCAAAATGTTATGGGGAATTTTGAACTCAAGACAGTTTGTAGTCTTATTTTTAGTCACAGCTAACATGCTGCCATTTACACACTTTATTAGACAGTCTCATTCAAATTTActacatttaattaaatttaataCAAGTTATAGTCCTACGTAATAAGTGTGTACAACTTTGAGATGATTGTGCATTTAAAATCATTTGATGATGATAATAGTGTTAAAAAAGGCAAATGTTTGCTCTGTAACCACTGTAGTACAATCGCTGATAATTGACACTCCGTCTGCATCCATGTATGGAATTATATCTTAACTAATTTTATTTAAACCCAACAATAATGTCATGTTTATGACCAAGTTGTATTGTCATATAGCAAAATAATAAACTAAAGTATATGAAAGAAGTCATTGTTAGCTTGTTGTACATATGCAGTCATAATACATTTTCACTCCACCAGAAAAGTTCTATTCTCTTTGTATCCTGTAGGGGACAGTATTGTACCACAAGGAATATTGTATATTCTGCATTTCAGGAAGAAATGACATGACAGTTGAAGAAAATCACATTGAAATCAATGATATCATATTCTGTATAATTGTGTAACATATTGTTTGCTTTGGCATACTGTTTAATGAACATTACAAATAACCATTTGCCCTGATGTTGGTTATGAGGATTTAAATTGTTGCTGACCATTTCATGTTTGTGATGGTGGCCTATGATCCAAAGCCATATAAAACTTGGTTTTTACAAATCTA

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17099 ANXA13; annexin A13

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU153873 lncRNA upstream 82334 13473014 ~ 13473251 (+) True G114095
TU153872 lncRNA upstream 83228 13469511 ~ 13472357 (+) True G114094
TU153838 lncRNA upstream 199535 13354254 ~ 13356050 (+) True G114063
TU153797 lncRNA upstream 266582 13288193 ~ 13289003 (+) True G114032
TU153826 lncRNA upstream 268366 13286650 ~ 13287219 (+) True G114055
TU154143 lncRNA downstream 92575 13659042 ~ 13659381 (+) True G114271
TU154180 lncRNA downstream 166215 13732682 ~ 13732963 (+) True G114301
XR_005640643.1 lncRNA downstream 176808 13743275 ~ 13840945 (+) True LOC120567951
TU154234 lncRNA downstream 404598 13971065 ~ 13971281 (+) True G114350
TU154260 lncRNA downstream 472215 14038682 ~ 14040236 (+) True G114371
XM_039816387.1 mRNA upstream 925 13487461 ~ 13554660 (+) True LOC120568709
XM_039816492.1 mRNA upstream 134620 13411953 ~ 13420965 (+) True LOC120568788
XM_039816255.1 mRNA upstream 145130 13394488 ~ 13410455 (+) True LOC120568628
XM_039816256.1 mRNA upstream 145130 13394491 ~ 13410455 (+) False LOC120568628
XM_039814776.1 mRNA upstream 162982 13389221 ~ 13392603 (+) True LOC120567765
XM_039815733.1 mRNA downstream 11765 13578232 ~ 13592369 (+) True LOC120568315
XM_039815760.1 mRNA downstream 54093 13620560 ~ 13629924 (+) True LOC120568344
XM_039815762.1 mRNA downstream 54093 13620560 ~ 13629924 (+) False LOC120568344
XM_039815758.1 mRNA downstream 63791 13630258 ~ 13640164 (+) True yme1l1b
XM_039815759.1 mRNA downstream 63791 13630258 ~ 13640164 (+) False yme1l1b
unassigned_transcript_558 other upstream 337375 13218139 ~ 13218210 (+) True trnae-cuc_17
TU153770 other upstream 430122 13123055 ~ 13125463 (+) False ndufb3
TU153768 other upstream 438229 13114649 ~ 13117356 (+) False rpl37a
TU153727 other upstream 579948 12929215 ~ 12975637 (+) True G113979
TU154336 other downstream 720683 14287150 ~ 14295268 (+) False LOC120568245
TU154337 other downstream 721888 14288355 ~ 14290960 (+) False LOC120568245
TU154338 other downstream 723070 14289537 ~ 14295993 (+) False LOC120568245
TU154339 other downstream 726293 14292760 ~ 14295268 (+) False LOC120568245
TU154847 other downstream 1585329 15151796 ~ 15157199 (+) True G114789

Expression Profile