RNA id: XM_039816117.1


Basic Information

Item Value
RNA id XM_039816117.1
length 2765
RNA type mRNA
GC content 0.46
exon number 7
gene id mul1a
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26325488 ~ 26330262 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATGACATGCGCCGTTGTACGTCATCACGCAATGTTTTCATCACTACGTCACGTGGACAACACCGTTCAACAACTGAGTAGCTATGTCAACTTAAGTCTTCTTTTCTCTGACAGGTCTGCAGTCACAGGAGACTCCGAGAGCATGGATGAGTTCCCTGTGAAGATGACAGAGGCAGTGTGTCTTGGGGCCAGCCTTGCCCTCTCAGGCATCTGCTACTATCTCTATAGGAAGAGCCGGACAACACTAGATAAACTCGATGATGCTCCACACTTCACCATAGATGGAAAACTCAAAGACATTTTGAAAGTTACTCCAGGAGCGTGTCTACAGTATGCTGTCATCGAAGGTGCTGTGCACCCAGTAGGCGAGCCTCTGACAAGCCCTTTCCAAAAAGACTTTGTCGGGGTGTTGCAGAAATTCATGTTGAGAGAACACAGGCTGGTGTGGAATGGGCTTTCACGCACTTGGACGGACAGTGAACGAGTCTTGCACCAAAGAGTGAACGCAGTGCCCTTTGTGTTAGTGGGATCAAATGAGACCGCAGTCAAAGTTCTGTGCCCCCTGCAGGCCTCTGGAGTGCACATGGAGACTACCCATGAGAAGTTCCACCAGGTTAACTACGGCTTGGGTGACATCATAGGACAATACCTCAGTGGGGAGAAGCTTAAAGGGCAACTGGAGACCGAGGAAATGCTCAAAGTGGGCACAACTCTTACTGGCGTGGGCGAGTTGATACTGGACACGGACGGCACCCTGAATCTCCGACCCCCTTCTAATGGCTCACAGTATTTTTTGAGCATTACAGACTTTGACACCCTGCTGGGAGAGCAAGAGAGCAAGGCTGTTTTGTGGAAGGTGCTGGCCATCGGCTCTGCTTTGGTGGGGGCAGGGGTCCTCCTTTGGGTCGGCCGCCGCTACTACTACCAACTAAGACTTCGCTGGGAGAGGGAGCAGGAGAGGAGGGAATTTGAGAGACTGCAGGCTGAAGCCCCAAGGGCACATGCTCCAGTAAGGGGCCCTGAGGCCCTTCAAGATGGGGCCGAGGAATACATAGAGAATGCCTGTGTGATTTGCCTCAGTCAGCCACGGAACTGTATTCTGTTAGACTGTGGGCACGTGTGCTGCTGCCACAGCTGCTACCAGGCTCTTCCCCACCGCCGATGCCCTATATGCAGACAGGATATCAGCAGAGTGGTGCCTCTCTACCACGTCTAAGGCCCCTGTGTGATGACATGACCTCAGTGGGGCTTCAACGCCATACAAACTGTACCAGCGTTACACCTCAGAGGTCTAGAGAAATTCTCCCCCGCAGTCTAAGTGACTGTTTACTGTAGGTTTTTTCAACAGACAATTTCTAGGCATTCACTTAACCTTCTCAAACCTACCTTTGTTCAGCTTTTTCTGATACGACAGATACTGCTGCTCCTTTGTCTACTTCCATTTTTACAGTAGCCCTTTCCTCATTTAACCTTTACATACACATAGTAGGGTTTCTCAATTTCTGCATCATGTCAGAACCAGTGTCCTCACCCTCCGTCTCTGTAGACCTAATCACTGTGACGTCGCGCTAACACATCAATCACTTCCAGGTAGACAACTGGCTGCTGATTTGAATTTTGGAGATAAGCGAAATCGgcaaacttgtttatttctgttgtcattttcaacCGTAACTGTAACATTTGAAGATATGTATTGTAAAACACGGGGGCAGGGGGGTTTGACGTTTCTGATGGGTTTATTTTCTGTACCGTGTTGCTTTGCTAGCatctttgataaaccaaatctaaCATCACGAACAGCAACATCTCACCGCCGGTCAGACCGACTGCTTGTTTTGTCTCCAAGCCAACGTTAGTGAAAAGTGCtgacatatgaaagcatcaaacatgctttttaaatgaatgagatGAGTAACATCCAGTTGTTCCTCGTCCCTGATTGGTAATTCTATGGAATAGATGCTGGGATTTTCTACCTGGAAGGTATTGTAAACAAACATCGCGATTCTTTTATTATTCTACATCCATGGATTGGGTCTATAGAAAACAGTTCAAACTCTCTGACGTTACCTGGGTGGTACTTTGTGACAAAGTTTGGTGCTGGTTGAGTTTTTGCTGACCCTGCCTTCTGTCACTCCAGCTGGGCAGGCAGGGGATGTCGTCAggccgacagcccctccacGGGACAGCCAGAGAGACTGGCCTCTACCACCGGCCATTCCGGCTCTTTACTTTGGTCGCTTTCATCCGCCTGGGCTGTAGCATCCTGGTGCTCGGTCCACCTGGTCTGCAATTTTACTGCTGTAAAGAATAAAGATTTTTCTTTCaagaacatactgtatgtataaaatAATGTGAATTGTAAGGATAATGTGCAAACACTTTGTTCACTACAGAGTTTCAGTGAGGTGTATCTGTAATTGTATATAAGAAATACAGGGAGATGAAGTAATTAGAAAAAGGTGTACAGAGATGTTTATTTTCCTACGTGTCAGTTCTGTGCCTTATGGTAATTTATATGGCTGCTACTGTCTTAGTGTGATTAAACTGTATGTATCTGAATAACTTAAGTCTGGTCAGAAGGAGCAAAGCTTTTGTTTCAACCACTTTCAGTTACATATTTGAGTCACAGGAAGTTATTGAAGCAAAGATACATTTATTGCCAAGACGAAGTGAGTGTTATTAATGCACTAAAAACAGGCGAGAGTGTGTGAAATGTTGGATAGTTGGAACTAAACAATAAAGCATCACTGTTTGAACCAA

Function

GO: NA

KEGG:

id description
K15688 MUL1; E3 ubiquitin-protein ligase MUL1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU159094 lncRNA downstream 5925 26315822 ~ 26319563 (-) False camk2n1a
TU159059 lncRNA downstream 16162 26308787 ~ 26309326 (-) True G118002
TU159052 lncRNA downstream 113740 26211508 ~ 26211748 (-) True G117995
TU159051 lncRNA downstream 114820 26210349 ~ 26210668 (-) True G117994
TU159050 lncRNA downstream 130604 26193007 ~ 26194884 (-) True G117993
TU159131 lncRNA upstream 91188 26421450 ~ 26425869 (-) False LOC120569074
TU159132 lncRNA upstream 91188 26421450 ~ 26424927 (-) True LOC120569074
XR_005640834.1 lncRNA upstream 91193 26421455 ~ 26426798 (-) False LOC120569074
TU159151 lncRNA upstream 143625 26473887 ~ 26474956 (-) True G118075
TU159153 lncRNA upstream 147201 26477463 ~ 26479678 (-) True G118076
XM_039816630.1 mRNA downstream 5893 26315770 ~ 26319595 (-) True camk2n1a
XM_039815723.1 mRNA downstream 121928 26195843 ~ 26203560 (-) True map6d1
XM_039814882.1 mRNA downstream 266916 26052099 ~ 26058572 (-) False LOC120567824
XM_039814881.1 mRNA downstream 266916 26057308 ~ 26058572 (-) True LOC120567824
XM_039816737.1 mRNA downstream 336541 25972731 ~ 25988947 (-) True LOC120568966
XM_039816115.1 mRNA upstream 4178 26334440 ~ 26348151 (-) False vwa5b2
XM_039816114.1 mRNA upstream 4178 26334440 ~ 26348151 (-) True vwa5b2
XM_039815716.1 mRNA upstream 62627 26392889 ~ 26400884 (-) False eif4e2
XM_039815717.1 mRNA upstream 62627 26392889 ~ 26400884 (-) True eif4e2
XM_039815712.1 mRNA upstream 70720 26400982 ~ 26410407 (-) True capn10
TU158687 other downstream 1402170 24922203 ~ 24923318 (-) True G117732
TU158445 other downstream 1788992 24499380 ~ 24536496 (-) True G117560
XR_005640841.1 other downstream 2303987 24021439 ~ 24021501 (-) True LOC120569138
XR_005640840.1 other downstream 2305050 24020362 ~ 24020438 (-) True LOC120569137
unassigned_transcript_562 other downstream 2456262 23869155 ~ 23869226 (-) True trnap-agg_8
TU159298 other upstream 331359 26661621 ~ 26665952 (-) True G118175
XR_005640672.1 other upstream 489576 26819838 ~ 26824570 (-) False cirbpa
TU159721 other upstream 1340714 27670976 ~ 27675360 (-) False LOC120568986
TU159739 other upstream 1383205 27713467 ~ 27714390 (-) False G118524
TU159738 other upstream 1387289 27717551 ~ 27718759 (-) True G118524

Expression Profile