RNA id: XM_039816316.1


Basic Information

Item Value
RNA id XM_039816316.1
length 1053
RNA type mRNA
GC content 0.59
exon number 7
gene id LOC120568662
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 274 ~ 45981 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctccctctttctgtccccctctctctctttctctctctctctgtaggttTCAGTCTTTGCATTATAATTTCTCTCATTCAGTGCTGCGAGGACGCTGAGGTTCTACAGCCGACAATCAGACAgaccctgacctgtgacctctgacccctgacCCCTGACCTCTGAAGGAGCCATGAACCGTCTCCACAATTCTCTGGGTCCTCCTGAATCAGTCAGTCCGTCTGCATCTCCGTCTTCTCGCCGTGGCCGCAGTGacgaagaagaggaggaagaggaagatctGAACAAAGCGTTTGATGTTCAGGGTTTTCAGCAGATCCTTCGTCCTGCAGCTCGCAGCCCACCAGAGAAACTCAGAGTCTACGATGAGCAGGACTTTGAAGATCATCGTCACTTTTCCCTCCAAGTCCATCACCCTCTGTCCAAACCCCCCGCTGACAGCCGCAGGAAGAGGACCAATGAGGGGAGGAAGGAGGGCAGGCGAGGCGCCGCCCCCAACGGCGCCGCCGCCACCATAGAAGAAGGCCGGGAGGACGAGGACGGCGAGGACGAGGCCTTCAGTCAGAATGAAACAGAGCAGCGCCGCCAGACGCCCAGTCACCGATTGGACGACGTCCCGGCAGTGCGGCGTCACCTGGTGAGGCGCAGCTCCAGAGGGCCGATCGTCCACGCCACCAAAGAACCAATCAGCAGCCGGACGCCATCACACAGCCAACCGGACCGCACGCCTCACGAGGTGTTTGTGGAGCTGAACGAGCTGGTGATCGACAGGAACCAGGAGCTGCAGTGGAGAGAAACGGCTCGATGGATAAAGtttgaggaggaggtggaggaagagaCGGAGCGCTGGGGGAAACCTCACGTTGCCTCGCTGTCTTTCCGCTCGCTGCTGGAACTCCGAAAAACCATCTCGCACGGCGCGGTGCTGCTGGACCTGAAGCAGAAGACTCTGCCGGGCATCGCCCTGCAGGTGGTGGAGCAGATGGTGATCTCAGACCAGATCTCAGCTGAGGACCGGGACAACGTCTTCAGAGCTCTGCTGCTCAGACACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149189 lncRNA upstream 451 46432 ~ 53438 (-) True G110845
TU149199 lncRNA upstream 27862 73843 ~ 90664 (-) True G110852
TU149201 lncRNA upstream 46574 92555 ~ 111366 (-) False LOC120568736
TU149214 lncRNA upstream 46574 92555 ~ 111366 (-) False LOC120568736
TU149215 lncRNA upstream 46574 92555 ~ 111392 (-) False LOC120568736
XM_039816953.1 mRNA upstream 6627 52608 ~ 63460 (-) True ttc19
XM_039816727.1 mRNA upstream 18596 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA upstream 20166 66147 ~ 89942 (-) False LOC120568960
XM_039816023.1 mRNA upstream 74869 120850 ~ 145048 (-) True fastk
XM_039814765.1 mRNA upstream 190363 236344 ~ 243099 (-) False LOC120567755
TU149180 other upstream 11426 57407 ~ 174865 (-) True G110840
TU149234 other upstream 86747 132728 ~ 140682 (-) False fastk
TU149261 other upstream 189276 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 189276 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 189276 235257 ~ 243086 (-) False LOC120567755

Expression Profile