RNA id: XM_039816322.1


Basic Information

Item Value
RNA id XM_039816322.1
length 1817
RNA type mRNA
GC content 0.48
exon number 2
gene id ackr4a
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18836672 ~ 18841174 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACGCCGAGTACAGAACTCCCATTTTGTAACTTCCCACCCACTTGTGGTGCGCGGGTGTGAAATCAAACGGACCCTCGTCTGCACAGAGCGCTCGTAGTGTAGTCTGAAACAAAAGCTTGGAGCTGCAATGGCGCAAATAGACGGGACCGATAGGTGAATAAAACCCTTTTTATCTGATCAGCATGGATGTCTCAGAGGAGAATGACTACTACTACCATGAAAACATCAGCCTCAACTTCAGCTACGATGACTACCCAGTCCTCTGTGAAAAGGGTGACGTTCGTTCCTTCGCAGCCCTTTTCCTCCCCATCATGTATACGATGTGTCTGGTGGTGGGACTGGCAGGGAACGGCTTAGTCGTGGGGGTCTACGCCTACCACAAACGCCTCAAGACCATGACGGATGCTTTCCTGACCCACCTGGCTGTGGCTGACCTGCTCCTGCTCTTCACGCTGCCTTTCTGGGCTGCTGATGCGACAAGGGGCTGGGAGCTGGGCGAGGCCATCTGTAAGATCGTGTCTGCCTGCTACACGGTCAACTTCACCTGCTGCATGCTGCTGCTGGCCTGCATCAGCCTGGATCGTTACTTGGCGCTGGCCAGGGCGCAAGGTAAAGACCAAAGTCGGCGCTTGCAGAGGATATTCACCAGGAGACACTGCTGGAAGATGTGTTTAGTTGTGTGGGCGACAGCTTTCGTCCTTGGTCTTCCCGATTTAATACTCTCAGAAGTGAGATGGGCATCTAATAGGAGCATCTGTCTACCTATCTACCCTCCATCAATGGCTCAAGGGGGGAAAGCTGCTCTGGAGATAGCAGAGGTGCTGCTGGGATTCCTGCTTCCATTCCTGGTTATGGTGATGTGTTACTGGAGCGTGGGCCGAGCACTAAAGGGCCTCCCTGTGGAGAGCAGAGGCAAGAAGTGGAAAGCTCTACGTGTCCTCCTAATAGtagtgggggtgtttgtggtcACTCAACTGCCTTATAACGTGTTGAAGGTCTACCGGGCGATGGACTCAGTCTACGCATTAGTGACCCACTGTGGGACGAGTAAAGTGTTGGATCAGGCGACTCAGGTGACGGAGAGCTTGGCCCTCACTCACTGCTGCCTCAACCCGATCCTCTACGCCTTCGTGGGGTCATCTTTCAGGCAGCACATGATGAAAGTGGCCAAGAAGTTTGGcgagaagagaagaaagagaagggaaAATCCTGCAGGGGAAGAGATGGAGATGTCATTTAACTCCCACAGTGCATCCCAAGAGACGAACACATTTTCAATATGAGTCAACACTAGTGTCACGGTGGAAGACACATGAATCAAAATCACTTATTTAGTATAGAAGAAGAGCAGATACAGCAGCAGTACAAGCATGTGTGGAAATCAATACGATGTACACAAATTGCACGTCGTTTTAACACTTAATTCCCTCCACAATACATCAAAAAGAGGAAGTTGTTAGTCATATTTTTCTGCTCCTGTTTGTTGAAATGTCTTTGAGCTAGGCATTCTTGTTTACTTTCAAAGTCAAAAGAAGTGTATATTTTTTCAGTTGTGAGTGATGAATGAAAAGGGgatttggctttgttttgaGCGATGTTTTTTATAGTTGTATACCCTGGTCCAGAGGAAACAATATTTCACTtcaactgtatttatttttttttacaaagttggCATTACAGTGAACTCTTTGGAATTtgactttaaaggaacacgccgactttttgggactatattgggactatattctcagacaggttgttgcaaagcaaatcattccgcccaagtactatattcttccgtctgagaatatagt

Function

GO: NA

KEGG:

id description
K04186 ACKR4, CCRL1, CCR11; atypical chemokine receptor 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU156304 lncRNA downstream 1909 18834524 ~ 18834763 (-) True G115917
TU156256 lncRNA downstream 116085 18703073 ~ 18720587 (-) False LOC120568909
TU156247 lncRNA downstream 145493 18689229 ~ 18691179 (-) True G115868
TU156242 lncRNA downstream 152428 18683606 ~ 18684244 (-) True G115867
XR_005640750.1 lncRNA downstream 172896 18662841 ~ 18663776 (-) True LOC120568692
XR_005640745.1 lncRNA upstream 7980 18848063 ~ 18849606 (-) True LOC120568670
TU156340 lncRNA upstream 7983 18848066 ~ 18849587 (-) False LOC120568670
TU156341 lncRNA upstream 7983 18848066 ~ 18849168 (-) False LOC120568670
XR_005640747.1 lncRNA upstream 20630 18860713 ~ 18863108 (-) True LOC120568676
TU156345 lncRNA upstream 25143 18865226 ~ 18866084 (-) True G115944
XM_039816654.1 mRNA downstream 116257 18703064 ~ 18720415 (-) False LOC120568909
XM_039816656.1 mRNA downstream 116311 18703064 ~ 18720361 (-) False LOC120568909
XM_039816653.1 mRNA downstream 130623 18703064 ~ 18706049 (-) False LOC120568909
XM_039814523.1 mRNA downstream 181476 18647081 ~ 18655196 (-) True samd7
XM_039815327.1 mRNA downstream 190257 18628974 ~ 18646415 (-) True sec62
XM_039815897.1 mRNA upstream 79116 18919199 ~ 18930384 (-) False si:ch211-106h4.6
XM_039815896.1 mRNA upstream 79116 18919199 ~ 18930384 (-) False si:ch211-106h4.6
XM_039815895.1 mRNA upstream 79116 18919199 ~ 18930384 (-) True si:ch211-106h4.6
XM_039815898.1 mRNA upstream 79116 18919199 ~ 18929346 (-) False si:ch211-106h4.6
XM_039816746.1 mRNA upstream 92056 18932139 ~ 18935491 (-) False LOC120568972
TU156258 other downstream 118128 18716882 ~ 18718544 (-) True LOC120568909
XR_005640621.1 other downstream 342184 18483156 ~ 18494488 (-) False sppl2
TU155671 other downstream 1727768 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1791610 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1795196 17039800 ~ 17041476 (-) True ly97.3
TU156342 other upstream 4822 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 91891 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 381708 19221791 ~ 19222726 (-) True G116084
TU156578 other upstream 624617 19464700 ~ 19465380 (-) True G116138
TU156767 other upstream 953751 19793834 ~ 19795709 (-) False xcr1b.1

Expression Profile