RNA id: XM_039816415.1


Basic Information

Item Value
RNA id XM_039816415.1
length 1343
RNA type mRNA
GC content 0.48
exon number 2
gene id gpr160
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 18603307 ~ 18604790 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gaaaATTCCACTGTGAGTTTGGTTTTTGTAATTTCCATACAGTCAAAGCTGAAAAGAAATCATAAGTCTCTGTAATGACCCACAGTTCCTGGTGCACTTCTGGTTAAAAAGTCTTTCAGAGTGCACACCATGAATTATGTCCATCCCCTCCATCCTGCTCGGTCTGGGAGGAAAATGTCTGCTCAACTGGGCCCTGGTGTTTCTCCAGAGGAACCACACCTGCAAAAGCTTCCTGTGGGTTTTCAGCGTTTCCCTCGCTGTCGTCGACTCAATCCTGACCCTCTCTGTCACCACCCTTCACGTCCATGCTGATGAATACGCCCTCCTCCTTGGCTTGAAGCTGACCAGGTACCATGTATGTTTGCTGGTTCAAATCCTTGGACAAGTCTACAGTGCTCTGCAGTGGCCTGTTGTAGTCGTGGCCGGTTTGGACCATTTCTTCACTGTCACTCGAAGGTTGCAACCCACCACCGCCATAGCCAGATGGATTGTCTGCTTATTAGTGACTGGCTTCCTGTGGTACCTCACTGCTCTCTACGTCTTCCTGCTGTCTGACTTCATTCCTGTCATGGAGGATGTGTCTTACTACCAGATACACCAGTGCTGGGTCTTCCACACCACTCAGATCCTGCAGGTTGCCATGTTTCTCCTCCTGACTCTGGGCTGTGCAGCGTTGCGTGCTGGGTGCAGCACACGATCATTCAAAAATCCTCCTCTGAGAGACCAAATTACAGAGAGCATTCACTCCAGAACAAGTGTTGTTCACCAAGCCCTGCATATATTTCTGAACACATGGGCTTTATTCCTGGGTTTTCTGGCTGCGCTCCTCCTGCTACCTGTGGGAATACCTGCATACCTGGGTCTGAACATTGCCTGGCTCTGCTTCCTCAACAGCCTTCTGATAACAGTCGTTTTATGTGCAGTCTGTCCAGGCTCGCAGCTAGCACAGGGCCTGGCAGCAGTTCCTCCCGACAGCTTCTGTGAGTGGAGATTTAAATTTAGCCTGGCTGCAGAGGACAGAACATGACTGCTCAACGCAAGCAAGCAAGTGAAAACAGGCTTTGTGTTAGACAAAGTGGAATTGGCTGCTGAGACTTCAATGTCTTTTCGAAAGAAAGTAATTTGTATTTCTAAAGTTGGGTAGCCAAGGTAGCAGCACAGCTTTACGAATGGCAATGTGGTTCAGGtcggtcagtccaccactttggcccagaccaaaatatctcaacaactattggatggattttgGTGCTGACGTTCAATGCCCTAGGTGAATAAACCCTATTGcattgacatttgtggttttgagtgaaatgtatGAACAACTATTAAACATATCGATT

Function

GO: NA

KEGG:

id description
K08438 GPR160; G protein-coupled receptor 160

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640793.1 lncRNA downstream 67694 18534647 ~ 18535613 (-) True LOC120568822
TU156134 lncRNA downstream 147305 18454033 ~ 18456002 (-) True G115782
TU156082 lncRNA downstream 217348 18378400 ~ 18385959 (-) True G115738
TU156057 lncRNA downstream 307519 18295562 ~ 18295788 (-) True G115722
XR_005640696.1 lncRNA downstream 317252 18270334 ~ 18286055 (-) True LOC120568297
TU156215 lncRNA upstream 10011 18614801 ~ 18615272 (-) True G115848
TU156218 lncRNA upstream 16043 18620833 ~ 18621220 (-) True G115851
XR_005640750.1 lncRNA upstream 58051 18662841 ~ 18663776 (-) True LOC120568692
TU156242 lncRNA upstream 78816 18683606 ~ 18684244 (-) True G115867
TU156247 lncRNA upstream 84439 18689229 ~ 18691179 (-) True G115868
XM_039817002.1 mRNA downstream 82284 18508455 ~ 18521023 (-) False phc3
XM_039817001.1 mRNA downstream 83243 18508455 ~ 18520064 (-) False phc3
XM_039817004.1 mRNA downstream 83243 18508455 ~ 18520064 (-) False phc3
XM_039817003.1 mRNA downstream 83243 18508455 ~ 18520064 (-) False phc3
XM_039816999.1 mRNA downstream 83243 18508455 ~ 18520064 (-) True phc3
XM_039815327.1 mRNA upstream 24184 18628974 ~ 18646415 (-) True sec62
XM_039814523.1 mRNA upstream 42291 18647081 ~ 18655196 (-) True samd7
XM_039816654.1 mRNA upstream 98274 18703064 ~ 18720415 (-) False LOC120568909
XM_039816656.1 mRNA upstream 98274 18703064 ~ 18720361 (-) False LOC120568909
XM_039816653.1 mRNA upstream 98274 18703064 ~ 18706049 (-) False LOC120568909
XR_005640621.1 other downstream 108819 18483156 ~ 18494488 (-) False sppl2
TU155671 other downstream 1494403 17039800 ~ 17108904 (-) False ly97.3
TU155672 other downstream 1558245 17043126 ~ 17045062 (-) True G115406
TU155670 other downstream 1561831 17039800 ~ 17041476 (-) True ly97.3
XR_005640632.1 other downstream 1801043 16756331 ~ 16802264 (-) False epb41l3b
TU156258 other upstream 112092 18716882 ~ 18718544 (-) True LOC120568909
TU156342 other upstream 240115 18844905 ~ 18846277 (-) True G115941
TU156358 other upstream 327184 18931974 ~ 18935477 (-) True LOC120568972
TU156517 other upstream 617001 19221791 ~ 19222726 (-) True G116084
TU156578 other upstream 859910 19464700 ~ 19465380 (-) True G116138

Expression Profile