Item | Value |
---|---|
RNA id | XM_039816539.1 |
length | 4154 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 18 |
gene id | pde1cb |
representative | True |
Item | Value |
---|---|
chromosome id | NC_053122.1 |
NCBI id | CM020919.1 |
chromosome length | 39550354 |
location | 19648419 ~ 19751633 (+) |
genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
species | eurasian perch (Perca fluviatilis) |
id | description |
---|---|
K13755 | PDE1; calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU156627 | lncRNA | upstream | 10007 | 19638170 ~ 19638412 (+) | True | G116175 |
TU156626 | lncRNA | upstream | 10296 | 19637878 ~ 19638123 (+) | True | G116174 |
TU156620 | lncRNA | upstream | 20800 | 19627254 ~ 19627619 (+) | True | G116168 |
XR_005640784.1 | lncRNA | upstream | 24235 | 19619229 ~ 19624184 (+) | True | LOC120568776 |
TU156563 | lncRNA | upstream | 80401 | 19554787 ~ 19568018 (+) | True | G116128 |
TU156655 | lncRNA | downstream | 860 | 19752493 ~ 19754448 (+) | True | G116200 |
TU156660 | lncRNA | downstream | 81490 | 19833123 ~ 19834373 (+) | True | G116204 |
XR_005640610.1 | lncRNA | downstream | 85181 | 19836814 ~ 19840804 (+) | True | LOC120567786 |
TU156670 | lncRNA | downstream | 121000 | 19872633 ~ 19873049 (+) | True | G116214 |
TU156671 | lncRNA | downstream | 132962 | 19884595 ~ 19885699 (+) | True | G116215 |
XM_039816422.1 | mRNA | upstream | 1895 | 19639508 ~ 19646524 (+) | True | LOC120568742 |
XM_039816212.1 | mRNA | upstream | 32565 | 19603644 ~ 19615854 (+) | True | LOC120568599 |
XM_039816463.1 | mRNA | upstream | 55855 | 19579117 ~ 19592564 (+) | True | rgs20 |
XM_039816464.1 | mRNA | upstream | 55855 | 19585570 ~ 19592564 (+) | False | rgs20 |
XM_039816469.1 | mRNA | upstream | 134957 | 19510386 ~ 19513462 (+) | True | myl12.2 |
XM_039814766.1 | mRNA | downstream | 17656 | 19769289 ~ 19772164 (+) | True | neurod6b |
XM_039814781.1 | mRNA | downstream | 51358 | 19802991 ~ 19826972 (+) | True | LOC120567771 |
XM_039814794.1 | mRNA | downstream | 103355 | 19854988 ~ 19882428 (+) | True | LOC120567775 |
XM_039814796.1 | mRNA | downstream | 103355 | 19854988 ~ 19882428 (+) | False | LOC120567775 |
XM_039814795.1 | mRNA | downstream | 103357 | 19854990 ~ 19882428 (+) | False | LOC120567775 |
unassigned_transcript_559 | other | upstream | 131474 | 19516853 ~ 19516945 (+) | True | trnar-ucu_13 |
TU156400 | other | upstream | 629693 | 19017058 ~ 19018726 (+) | False | LOC120568770 |
TU156233 | other | upstream | 974357 | 18672562 ~ 18674062 (+) | False | LOC120568691 |
TU156065 | other | upstream | 1294075 | 18305149 ~ 18354344 (+) | True | G115729 |
TU155940 | other | upstream | 1618524 | 18027280 ~ 18029895 (+) | True | LOC120567767 |
XR_005640618.1 | other | downstream | 621602 | 20373235 ~ 20375633 (+) | True | LOC120567833 |
TU157037 | other | downstream | 1131073 | 20882706 ~ 20915288 (+) | False | LOC120568904 |
XR_005640709.1 | other | downstream | 2119320 | 21870953 ~ 21897391 (+) | False | LOC120568354 |
TU157733 | other | downstream | 2856431 | 22608064 ~ 22612409 (+) | False | LOC120567968 |
XR_005640697.1 | other | downstream | 2889877 | 22641510 ~ 22678731 (+) | False | LOC120568311 |