RNA id: XM_039816551.1



Basic Information


Item Value
RNA id XM_039816551.1
length 1348
RNA type mRNA
GC content 0.47
exon number 7
gene id blvra
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 8164406 ~ 8175954 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTAAGTTGGTTTGCCAACCGCCATTAAACCAGAAAGAAGAAGCCTTCTACTTAAGAACCAGAACAGCTAGATTTCTTCGTGTCGGTCTCAACCAACGGAGCTACATAAAAGCAGTCGGCATGTTTGGAGCAGTGGTTGTTGGCATTGGAACAGCCGGTTTGGTGAGGATTAGAGACATGTTAGCACCTCTACCTGGCAGTCCTGCGGAGAAACTCAATGTCAGAGGATTCATttccagGAGAAGCCTGGGCACCCAGCAGGGAGTGAGTCAGATCTCATTGGAAGAGGCTATTAGCAGAGAAGACATTCATGCTGCGTTCATCTGCACTGAGAATGCATCGCATGAAGATTACGTCAGATCTTTTCTGCAGACAGGGAAACATGTCTGTGTGGAGTATCCCATGACCATGAGCTACAAGGCTGCTGCCGAGCTTTGGGATTTTGCCCAGGAAAAAGgagtGATTCTCCATGAGGAACACATCGAGCTGCTGACAGAAGACTTCAAAGAACTGAAAAAAGAGGTAGAGGGAAAAATCCTGCAGGAAGGTACTCTTCATTTTACTGGTGGAGTTTTGAAGCCTGGATTTGGTTTCCAAGCTTTCAGCGGCATCGCTCGCCTCACCTGGTTGGTCGAGTTGTTCGGTGATCTGTCAGTAACTGCAGCAACCATGGAGGAAGACTCTGGTACCAACTACAGCAAGTTGACCGCAAAGCTGCTAACTTCTGACAACAGACCTCTGACGTGGATTGAGGAACGGGGACCGGGCCTCCCCCGGGCCAAGaacatcaactttcactttgACTCCTGCACTCTGACCCAGATCCCTCCGGCGCCCAGGGGGGCTGTGGGCCTCTTCATGCAGGACCTGATCCAATTCTCTGCCAAGCTGGCAGGCCAAGTGAGTCCAGAGGAGCTCCAGAGGGAGAAAACCAGGATCCTACACTGCTTGCAACTGGCAGAGAGGATACAACAACTTTGCCAAAGTTAAATGGGGACTTAAATCTATCTTTATATTTCATCACCATGCCCTTAAGTTTTTGTATCCTAGTATAAGTATCATTTAGtagtatagacctttttcacggcagacatgttgacatgtcatagtatgaaaagcacaggtgtattcaaataCCATTAATgttggctgcattccacttaggagaggtcctggtattgtgcatgctgactcactgaaatatctcactGGGAACCTTGATGGAACTgtgccatcgttaaggttatcaatttcagctgtgcttttcctactagtgctacgtttacacgtggccggctattttcataaacggacatttcaacctctcagtttttaaaaataacatcgtg

Function


GO:

id name namespace
GO:0042167 heme catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0004074 biliverdin reductase (NAD(P)+) activity molecular_function

KEGG:

id description
K00214 BLVRA, bvdR; biliverdin reductase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU152081 lncRNA upstream 166862 7997161 ~ 7997544 (+) True G112813
TU152080 lncRNA upstream 178025 7986177 ~ 7986381 (+) True G112812
TU152079 lncRNA upstream 178898 7985293 ~ 7985508 (+) True G112811
TU152077 lncRNA upstream 186393 7977704 ~ 7978013 (+) True G112809
TU152065 lncRNA upstream 194272 7969510 ~ 7970134 (+) True G112798
TU152123 lncRNA downstream 14623 8190577 ~ 8191459 (+) True G112847
TU152134 lncRNA downstream 42292 8218246 ~ 8219062 (+) True G112855
TU152135 lncRNA downstream 47879 8223833 ~ 8231076 (+) True G112856
TU152142 lncRNA downstream 63071 8239025 ~ 8241419 (+) True G112862
TU152250 lncRNA downstream 150773 8326727 ~ 8327599 (+) True G112940
XM_039816763.1 mRNA upstream 102306 8044004 ~ 8062100 (+) True cdc14aa
XM_039814951.1 mRNA upstream 263588 7885498 ~ 7900818 (+) False dnai4
XM_039814949.1 mRNA upstream 263588 7886215 ~ 7900818 (+) False dnai4
XM_039814950.1 mRNA upstream 263588 7886215 ~ 7900818 (+) False dnai4
XM_039814710.1 mRNA upstream 364915 7792663 ~ 7799491 (+) True LOC120567733
XM_039815641.1 mRNA downstream 26270 8202224 ~ 8212592 (+) False tmem68
XM_039815640.1 mRNA downstream 26385 8202339 ~ 8212592 (+) True tmem68
XM_039816300.1 mRNA downstream 172405 8348359 ~ 8373438 (+) True gad3
XM_039815646.1 mRNA downstream 230975 8406929 ~ 8510408 (+) True LOC120568257
XM_039815645.1 mRNA downstream 230975 8406929 ~ 8510408 (+) False LOC120568257
XR_005640625.1 other upstream 262119 7885498 ~ 7902287 (+) True dnai4
TU151912 other upstream 1128706 7035027 ~ 7035700 (+) True G112670
TU151896 other upstream 1155249 7007242 ~ 7009157 (+) True G112655
TU151756 other upstream 1393494 6741101 ~ 6770912 (+) True G112562
TU151740 other upstream 1564026 6577407 ~ 6600380 (+) False LOC120568552
TU152240 other downstream 133896 8309850 ~ 8313076 (+) True G112932
TU152286 other downstream 230986 8406940 ~ 8454416 (+) False LOC120568257
TU152347 other downstream 533375 8709329 ~ 8712997 (+) False atg10
TU152348 other downstream 533375 8709329 ~ 8712997 (+) False atg10
TU152352 other downstream 537311 8713265 ~ 8715271 (+) False atg10

Expression Profile