RNA id: XM_039816859.1


Basic Information

Item Value
RNA id XM_039816859.1
length 1490
RNA type mRNA
GC content 0.54
exon number 4
gene id wnt9a
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 21133002 ~ 21151186 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ATTTTACACAGCTACTCAGGAGAAACGAAATGATCTGCCCTGGAGCCGCAGCAAAATGCTGGATGGACACCTACTCCTGGGATGGTTATCGTTCACTGTCATAGTGTATCTTCTCAACTTGCCTGGACCAACCGCAGCATATTTCGGGTTGACAGGTAATGAACCGTTGTCTATCCTGCCACTGAACTCTCTACCAGAGGAGAACGTGGGCAGGGCCCACTACAAGCTGTGCGACCGTCTCAAACTGGAGAAGAAGCAGCGCAGGATGTGCAGACGAGACCCGGGCGTGGCCGAGACCCTGAGAGAGGCCATCACCATGAGCGCCCTAGAATGCCAGTATCAATTCCGCTTTGAGAGGTGGAACTGCACCTTAGAGGGGCGCCACCGAGCCAATATATTAAAGAGAGGATTTAAAGAGACAGCCTTCCTGTATGCCATCTCCTCGGCAGGCCTAACCCATGCGATGGCCAAAGCTTGCAGCGCAGGACGCATGGAGCGCTGCACGTGTGATGAGGCCCCGGACCTGGAGAACCGCAAGGCGTGGCAGTGGGGAGGCTGCGGAGACAACCTCAAATACGCAAACAAGTTTGTCAAGGACTTCCTGGGCAAACGATCCAACAAGGACCTGCGCGCACGTGTGGACATGCACAACACAAATGTGGGCATGAAGGTAATCAAGGCCGGAGTGGAGACCACTTGCAAATGCCACGGCGTCTCCGGCTCCTGCACCGTCCAGACctgctggaggcagctcctgcCCTTCCACGAGATCGGCAAGCAGCTGAAGCAGCGCTATGAGACCTCCATTAAGGTCGGCAGCTCAACCAACGAGGCCACGGGGGAGGGAGAGATCTCCACAGGCCggagccagcagcagcagcagcagcagcaacagctacaacaacagcaacaacagcagcagcagcagcagcagcccgtGCCTGCCCTGAACGATCAGATCCCTCGCACTATGGACTTGCTGCACATTGAGGACTCGCCCAGTTTCTGTAGACCCAGCAAGTACTCGTCGGGCACGGCAGCCCGTAAGTGCTATAAGGACAAGAACTGCGACGCAATCTGCTGCGGGCGAGGCCATAACACTCAAAGTAGGGAGGTGACCCGGCCCTGCCAGTGCCAGGTGCGCTGGTGCTGCTACGTCGAATGCAAGCAGTGCACACAGAGGGAGGAGGTCTATACCTGCAAAGGGTAAACGCTGTCAGCCCCTACAATCAGTGGAGCAGGAAAGATGGTTGTGTTGAAGAGGagtggttgttttgtttttaaacaagATTTTGCTTCCACTGTCGGAACAGTGTTCTGCACACAAAAGAGGAGCGAGCTGATGGAGGAGCAATAAGCACTTTGAGGGATTTCTGTGGGTTGTGTTTCAGAGATCCTGTGGCCCCTGTGTCTGGGGTttgcagattaaaaaaaaaacttctcagacaaCTGGGTCAACATctcaagccttttttttttttttttttttt

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K01064 WNT9; wingless-type MMTV integration site family, member 9

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU157135 lncRNA downstream 25284 21107514 ~ 21107718 (-) True G116582
TU157133 lncRNA downstream 71762 21058592 ~ 21061240 (-) True G116580
TU157105 lncRNA downstream 137462 20988324 ~ 20995540 (-) True tmie
TU157050 lncRNA downstream 213286 20918969 ~ 20919716 (-) True G116525
TU157030 lncRNA downstream 305291 20827512 ~ 20827711 (-) True G116508
TU157207 lncRNA upstream 57556 21208742 ~ 21209773 (-) True G116651
TU157296 lncRNA upstream 146229 21297415 ~ 21300082 (-) True G116692
TU157354 lncRNA upstream 441553 21592739 ~ 21595306 (-) True G116743
TU157375 lncRNA upstream 507493 21658679 ~ 21660467 (-) True G116758
TU157461 lncRNA upstream 659676 21810862 ~ 21811146 (-) True G116832
XM_039814547.1 mRNA downstream 79226 21051339 ~ 21053776 (-) True jmjd4
XM_039814556.1 mRNA downstream 122426 21008048 ~ 21010576 (-) True higd1a
XM_039814544.1 mRNA downstream 126875 21001980 ~ 21006127 (-) True ccdc13
XM_039814543.1 mRNA downstream 126875 21002211 ~ 21006127 (-) False ccdc13
XM_039816213.1 mRNA downstream 137435 20984801 ~ 20995567 (-) False tmie
XM_039815361.1 mRNA upstream 46107 21197293 ~ 21201627 (-) True c11h1orf35
XM_039816564.1 mRNA upstream 62480 21213666 ~ 21268376 (-) True LOC120568841
XM_039816562.1 mRNA upstream 122198 21273384 ~ 21284939 (-) True atg9b
XM_039816561.1 mRNA upstream 123555 21274741 ~ 21284939 (-) False atg9b
XM_039816081.1 mRNA upstream 152175 21303361 ~ 21322484 (-) False asic1c
TU157096 other downstream 122433 21008049 ~ 21010569 (-) False higd1a
TU156767 other downstream 1337293 19793834 ~ 19795709 (-) False xcr1b.1
TU156578 other downstream 1667622 19464700 ~ 19465380 (-) True G116138
TU156517 other downstream 1910276 19221791 ~ 19222726 (-) True G116084
TU156358 other downstream 2197525 18931974 ~ 18935477 (-) True LOC120568972
TU157655 other upstream 1110812 22261998 ~ 22263498 (-) False G116969
TU157659 other upstream 1111937 22263123 ~ 22268559 (-) True G116969
TU158039 other upstream 2279180 23430366 ~ 23430992 (-) True G117259
XR_005640657.1 other upstream 2317434 23468620 ~ 23491612 (-) False LOC120568062
unassigned_transcript_560 other upstream 2716766 23867952 ~ 23868025 (-) True trnai-aau_23

Expression Profile