RNA id: XM_039816953.1


Basic Information

Item Value
RNA id XM_039816953.1
length 1334
RNA type mRNA
GC content 0.58
exon number 12
gene id ttc19
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 52608 ~ 63460 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTCGGGACTTCCGCTCGTAGTGTAAACAGTTAAGATGGCGGCTTGCAACGTTCGCAGCGCTGTCACTCAGACTCTGAGAGGACTCAGAGGGACACGAGGACACCTGAGACACATAGCTGCTGCAAGACAGCAGTGGGACCGCTCTGTGACATCACAGACTGGGCAGGGGAAGCActcggcatgctgggtaaccgTGAGACATGAGTCCATCGGGGGGGACCTCCAGAgcacacagaggaggaggggaggaggaggaggaggaggaggaggaggaggaagaagaagaagaagaggagtgCTGTGGGCGGCCGTTGccttcTCTCTGTTCAGCAGGTCTGATGAAGACCAGCGAGATGAAGCCCAGAGGAAGGAGGACGACATTATCCTGCTGCTGAAGAAAGCCAAGctaagTGTGTATCGGGGACAGCTGCAGGCTGCCTCTGGTTTCCTCCATCAGGCCGTTGCTCTGGCTCATCAGACCCACAACACTCAGGCCATCATCTACACATACAGCCTGATGGCGAACCTGGCCTACGTTCAGGGTCAGCTGGACAGCGCAGAAAAACTCTTCAAAGCAGCGATGAGCTTCCTGCTGTCGGGAGGAACGCCacagGACGACAACGCTGTCATCGAGATGTCTCTGAAACTCGCCACCATCTACGCTGAACAGAACAAggtGGAGCTTGCAGAGCATGGCTTCAGGTTCTGTCTGGAGTCTCTTGAGGCCAAACTGCAGAACCAGAAGGAAACAGCTGCAGAGGAGCTGACAGAGGAGCAGGAGGCTCTGAGGAAGGAGACCCGGCTGCTGCTGGGACTCTGTCTGGACTCCCGGGCTCGGTACCGGGCGTCCTCACTGCAGCTGGAGCAGGCAGGACGGGACTACCAGAAGGCCCTGGACATCTGCTGCTCAGAGCAGGGAGACAGGCACCctcagACTCTGGTGCTGATGAGCGACCTGGCCACCATCTTGGATCTGCAGGGTCGCCATGACGACGCCCTGGCGCTGGTCCAGCAGGCGGTGGATCTGAGCCGCTCCGCGGGTCACCCGGACCAACACGTGCTGCTGGGAAACATGGCGGGCATCCTGCTGCACACAGGCCGGCTCCAGGACTCGGTCCAGCTCTACCACGAGGCTCTGAGTCTGGCCCAGCAGGCCGGAGACCAGGAGGCCGTGACCCAGATCCAGGAGGGACTGGAGGaggtgaagaagaggaggaagcagcagcaggaagaggaggaggagaagaccGATCCTCAGTAGTCAGGTTCCACCCACATCGGCCTCAACTTCAACtaaaattaatatattataataataataataataaatgtt

Function

GO: NA

KEGG:

id description
K18169 TTC19; tetratricopeptide repeat protein 19, mitochondrial

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149188 lncRNA downstream 3166 44777 ~ 49442 (-) True G110844
TU149199 lncRNA upstream 10383 73843 ~ 90664 (-) True G110852
TU149201 lncRNA upstream 29095 92555 ~ 111366 (-) False LOC120568736
TU149214 lncRNA upstream 29095 92555 ~ 111366 (-) False LOC120568736
TU149215 lncRNA upstream 29095 92555 ~ 111392 (-) False LOC120568736
TU149218 lncRNA upstream 29095 92555 ~ 111366 (-) False LOC120568736
XM_039816316.1 mRNA downstream 6627 274 ~ 45981 (-) True LOC120568662
XM_039816727.1 mRNA upstream 1117 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA upstream 2687 66147 ~ 89942 (-) False LOC120568960
XM_039816023.1 mRNA upstream 57390 120850 ~ 145048 (-) True fastk
XM_039814765.1 mRNA upstream 172884 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 194615 258075 ~ 302142 (-) True adhfe1
TU149234 other upstream 69268 132728 ~ 140682 (-) False fastk
TU149261 other upstream 171797 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 171797 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 171797 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 203499 266959 ~ 288340 (-) False adhfe1

Expression Profile