RNA id: XM_039817006.1


Basic Information

Item Value
RNA id XM_039817006.1
length 2171
RNA type mRNA
GC content 0.54
exon number 3
gene id inhbab
representative False

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 632687 ~ 638896 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACGGAGTTTCTCCTCCACGACATTCTGTGTTTGCAGATTCTGTGTGGCTCTGCTGATAATTagcatttctgtaaatgtgccggTGATGTCCTTTGGAGaacagagcaacaggaaaccacaagacattagtacaggttcaAATCAGGACCATCAGGACCATCAGGACCAACAGAACCAACAGAACCAGAACAGCAGCTTCTCTGGAAGGATTTCTAACTTCCCTGTCAGCTGCTGAActatttgtgtttcttttggACCAacctctataatttacagagaaaaAACAGAGCAAGCCGGCTGGGTCTCTGATATAGTCTCTGCTTTTAGACTCAACTCTTCTGTCCATGTTGGAGCATCAGTGCCAGTCTGAAAACATCATGTCTTCTCTGTTTTCTGCCTTCTTCTTCCTGGCCATCGGTCTTCTCGTGGACGCCTCTCCGGCCGTCTCTCTGCCTCCGGAGAGCTCCTTGACGTCTCCACCTTCTCCAGCGTCTCCACCATCTCCACCATCTCCAGCATCTCTAGGGTCGCCACCGTCTCCACCATCTCCAGCCTGTCCGTCTTGCTCCCTGCCTCAGACGAGGAGGAACTCGTCGTCGCCCAACGGACAGAGCGACATGGTGGAGGCAGTGAAACGTCACATTCTCAACATGCTGCACCTGAGCAGCCGGCCCAACCTGACGCAGCTTGTCCCACGCGCCGCGCTGCTCAACGCCATCCAGAAGCTGCACGTGGGCCGCGTGGCCGAGGACGGCAGCGTGGAGATCCAGGAGGACGGCTGGGGCCCCGGGGCCTCAACGCCACCCGAACCCACCTCTGAAGTCATCATCTTCGCTGAGCCAGgagcCTCCCCGGACacggtgacctttgacctttctCAGGACGGCAGTGGCTCGGCGCTCGTGGAGCAGGCCAACGTCTGGATCTTCCTCAAGATTTCGAAGGGAAAGCGAGCTAGCGGCAAAGTGTTGCTGCGGCTGCTGCAGCGTCACCGCGACGACGGCGGCGATGAGAATGAGGAATGTGTTTCGGAGAAGATGGTGGACGCACGGCGCAGCGGCTGGCACACGCTCGCTGTCTCCCGCAGCGTCCAAACATTGCTGGATGCCGGCGGGGGCTCGCTCAGCCTGCGGATCTCCTGTCTGCTGTGTGCGGACGCCGCGCCCGTCCTGGCGCCAGGGGGGGGCGAGCACAGCGGCGCCCGGGACCAGCCCGGCGGTGCCCGGGACCAGTCCCACCGGGACCAGTCCCACCGGCCGTTCCTCATGGCGGTGCTGCAAGCCCCGGAGGAGGGGACGCAGCGCCGAGTCAAGCGAGGCCTGGAGTGCGACGGGAAAATACGCGTCTgctgcaaacggcagttttacGTGAACTTCAAAGACATCGGCTGGAACGACTGGATTATCGCTCCGTCTGGTTACCATGCCAACTACTGCGAGGGGGAGTGCCCCAGCCACATGGCGGGCTTCAGCGGCTCGGCGCTGTCCTTCCACTCGACCGTCATCAACCATTACCGCATGCGCGGCTACAGCCCGTTCCAGAACATGAGGTCGTGCTGCGTTCCCACGCGGCTGCGAGCCATGTCCATGCTCTACTACAACGAGGACCAGAAGATCATCAAGAAAGACATCCAGAACATGATTGTAGAGGAGTGCGGCTGCTCgtaaacacgcacacagacgGTAGAAACACGAACAATATCAGATCAGCACTTTCACCGTAAAGATTAAGTATTTATGTTTAGTGACGACGCATCTTTTCCACATTGGAACGACCTGAGAACACTATGCAACATCTCCTGCAAACTCAAACGACATCGTCTACATTTCTCTGTTCTAGCCTTcatatttctgttgttttctgttgttttctgctgttttctgctgttttctgctgttttctgttGTTCAGGTTCAACCATGTTGAGAGAAATGTGTTCAAACATTCCTGGCAGAGATTTAGATTCAGAAGAAAGCCAAAGAGAGGCGTGTGAGCTGTGAATAAATCAAATAGACCAGCTGTGAAGATTATTAGATGaaattatttaacactttgtTTTAGCAGTTTTTGGTCTTTGCTtcattgtggaaaaaaaaaatgttgccaactttatataatttatttgcattttttagcTTCGTCATTAAACAATGATGTTCGTCAACATTGAA

Function

GO:

id name namespace
GO:0040007 growth biological_process
GO:0005576 extracellular region cellular_component
GO:0008083 growth factor activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640620.1 lncRNA downstream 84035 548335 ~ 548652 (-) True LOC120567842
TU149347 lncRNA downstream 89502 497544 ~ 543185 (-) True G110925
TU149286 lncRNA downstream 235496 375313 ~ 397191 (-) True G110898
TU149283 lncRNA downstream 259996 267135 ~ 372691 (-) True G110895
TU149394 lncRNA upstream 38922 677818 ~ 767571 (-) True G110946
TU149419 lncRNA upstream 117025 755921 ~ 796589 (-) False G110964
TU149420 lncRNA upstream 117025 755921 ~ 756638 (-) True G110964
TU149407 lncRNA upstream 167366 806262 ~ 808340 (-) True G110958
TU149435 lncRNA upstream 172550 811446 ~ 812017 (-) True G110977
XM_039815538.1 mRNA downstream 9557 593907 ~ 623130 (-) False amph
XM_039815534.1 mRNA downstream 9557 593907 ~ 623130 (-) False amph
XM_039815543.1 mRNA downstream 9557 593907 ~ 623130 (-) False amph
XM_039815546.1 mRNA downstream 9557 593907 ~ 623130 (-) False amph
XM_039815542.1 mRNA downstream 9557 593907 ~ 623130 (-) False amph
XM_039816419.1 mRNA upstream 37435 676331 ~ 677734 (-) True LOC120568738
XM_039816947.1 mRNA upstream 184156 823052 ~ 839766 (-) True bfsp2
XM_039816949.1 mRNA upstream 184637 823533 ~ 839766 (-) False bfsp2
XM_039816971.1 mRNA upstream 204912 843808 ~ 848645 (-) True ccr9a
XM_039814840.1 mRNA upstream 256611 895507 ~ 901196 (-) True LOC120567797
TU149268 other downstream 250022 375712 ~ 382665 (-) True G110889
TU149269 other downstream 251071 375712 ~ 381616 (-) False G110889
TU149279 other downstream 344347 266959 ~ 288340 (-) False adhfe1
TU149280 other downstream 344347 266959 ~ 288340 (-) False adhfe1
TU149262 other downstream 389601 235257 ~ 243086 (-) False LOC120567755
TU149406 other upstream 115367 754263 ~ 766300 (-) True G110957
TU149470 other upstream 210286 849182 ~ 849492 (-) True G110988
TU149680 other upstream 366175 1005071 ~ 1005925 (-) True G111136
TU149674 other upstream 369998 1008894 ~ 1010100 (-) True G111134
TU149667 other upstream 373923 1012819 ~ 1021435 (-) False G111133

Expression Profile