Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640684.1 |
| length | 627 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC120568213 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 36871351 ~ 36875394 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640683.1 | lncRNA | upstream | 5211 | 36863799 ~ 36866140 (+) | True | LOC120568212 |
| TU162604 | lncRNA | upstream | 5822 | 36863793 ~ 36865529 (+) | False | LOC120568212 |
| TU162586 | lncRNA | upstream | 51577 | 36819563 ~ 36819774 (+) | True | G120796 |
| TU162483 | lncRNA | upstream | 312619 | 36411744 ~ 36558732 (+) | True | G120720 |
| TU162477 | lncRNA | upstream | 466586 | 36404553 ~ 36404765 (+) | True | G120714 |
| TU162630 | lncRNA | downstream | 84537 | 36959931 ~ 36971438 (+) | False | LOC120568208 |
| TU162641 | lncRNA | downstream | 214056 | 37089450 ~ 37090881 (+) | True | G120842 |
| TU162660 | lncRNA | downstream | 260965 | 37136359 ~ 37136750 (+) | True | G120860 |
| TU162670 | lncRNA | downstream | 289454 | 37164848 ~ 37214610 (+) | True | G120868 |
| TU162676 | lncRNA | downstream | 324561 | 37199955 ~ 37200583 (+) | True | G120872 |
| XM_039815569.1 | mRNA | upstream | 15508 | 36855196 ~ 36855843 (+) | True | LOC120568211 |
| XM_039815568.1 | mRNA | upstream | 26701 | 36844011 ~ 36844650 (+) | True | LOC120568209 |
| XM_039816078.1 | mRNA | upstream | 123683 | 36737148 ~ 36747668 (+) | True | LOC120568506 |
| XM_039816063.1 | mRNA | upstream | 160539 | 36624332 ~ 36710812 (+) | False | LOC120568504 |
| XM_039815567.1 | mRNA | downstream | 4524 | 36879918 ~ 37087443 (+) | True | LOC120568208 |
| XM_039815045.1 | mRNA | downstream | 333911 | 37209305 ~ 37230711 (+) | True | LOC120567940 |
| XM_039814685.1 | mRNA | downstream | 722420 | 37597814 ~ 37598425 (+) | True | LOC120567716 |
| XM_039815841.1 | mRNA | downstream | 1114171 | 37989565 ~ 38019068 (+) | True | LOC120568367 |
| XM_039815840.1 | mRNA | downstream | 1136372 | 38011766 ~ 38019068 (+) | False | LOC120568367 |
| TU162480 | other | upstream | 464662 | 36406121 ~ 36406689 (+) | True | G120717 |
| TU162479 | other | upstream | 465578 | 36405240 ~ 36405773 (+) | True | G120716 |
| unassigned_transcript_581 | other | upstream | 621824 | 36249445 ~ 36249527 (+) | True | trnal-caa_4 |
| unassigned_transcript_580 | other | upstream | 628747 | 36242522 ~ 36242604 (+) | True | trnal-uaa_9 |
| unassigned_transcript_579 | other | upstream | 629082 | 36242187 ~ 36242269 (+) | True | trnal-caa_3 |
| TU162632 | other | downstream | 135605 | 37010999 ~ 37018790 (+) | False | LOC120568208 |
| TU162730 | other | downstream | 427500 | 37302894 ~ 37306014 (+) | True | G120914 |
| TU162816 | other | downstream | 1136483 | 38011877 ~ 38019038 (+) | False | LOC120568367 |
| unassigned_transcript_597 | other | downstream | 1321647 | 38197041 ~ 38197122 (+) | True | trnas-cga_7 |
| TU162901 | other | downstream | 1880290 | 38755684 ~ 38755931 (+) | True | G121058 |
