RNA id: XR_005640767.1


Basic Information

Item Value
RNA id XR_005640767.1
length 311
lncRNA type inter_gene
GC content 0.43
exon number 3
gene id LOC120568737
representative True

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 103095 ~ 104273 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtagtctagagagtaagtagtttgtggtcccagtctagagagaaagtagcctagagagtaagtagtttgtggtcccagtctagagagaaagtagtctagagagtaagtagttCGTGGTCCCAGACTAGAGAGTAAGTagtctagagagtaagtagtctagagagtaagtagtttgtggtcccagtctagagagtaagtagtcTAGAGAGTGTAGTTTGTGGTCCCagtctagagagtaagtagtcTAGAGAGtaagtagtttGTGGTCCCAGACTAGAGAGTAAGTAGCCTAGAGAGTAAGTAGTTTGTGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU149199 lncRNA downstream 12431 73843 ~ 90664 (-) True G110852
TU149189 lncRNA downstream 49657 46432 ~ 53438 (-) True G110845
TU149188 lncRNA downstream 53653 44777 ~ 49442 (-) True G110844
TU149230 lncRNA upstream 15381 119654 ~ 141676 (-) False G110859
TU149231 lncRNA upstream 15381 119654 ~ 141901 (-) True G110859
TU149235 lncRNA upstream 36992 141265 ~ 145053 (-) False fastk
TU149190 lncRNA upstream 45725 149998 ~ 150962 (-) True G110846
TU149238 lncRNA upstream 46894 151167 ~ 202319 (-) True G110865
XM_039816727.1 mRNA downstream 13153 64577 ~ 89942 (-) True LOC120568960
XM_039816726.1 mRNA downstream 13153 66147 ~ 89942 (-) False LOC120568960
XM_039816953.1 mRNA downstream 39635 52608 ~ 63460 (-) True ttc19
XM_039816316.1 mRNA downstream 57114 274 ~ 45981 (-) True LOC120568662
XM_039816023.1 mRNA upstream 16577 120850 ~ 145048 (-) True fastk
XM_039814765.1 mRNA upstream 132071 236344 ~ 243099 (-) False LOC120567755
XM_039816038.1 mRNA upstream 153802 258075 ~ 302142 (-) True adhfe1
XM_039814761.1 mRNA upstream 204836 309109 ~ 310062 (-) True LOC120567752
XM_039816880.1 mRNA upstream 222153 326426 ~ 327379 (-) True LOC120569059
TU149234 other upstream 28455 132728 ~ 140682 (-) False fastk
TU149261 other upstream 130984 235257 ~ 243086 (-) True LOC120567755
TU149262 other upstream 130984 235257 ~ 243086 (-) False LOC120567755
TU149263 other upstream 130984 235257 ~ 243086 (-) False LOC120567755
TU149279 other upstream 162686 266959 ~ 288340 (-) False adhfe1

Expression Profile