Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005640826.1 |
| length | 649 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC120569017 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053122.1 |
| NCBI id | CM020919.1 |
| chromosome length | 39550354 |
| location | 33867395 ~ 33870784 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005640825.1 | lncRNA | upstream | 399 | 33861438 ~ 33866996 (+) | True | LOC120569016 |
| TU161561 | lncRNA | upstream | 15458 | 33811076 ~ 33851937 (+) | True | gng12a |
| TU161526 | lncRNA | upstream | 268738 | 33597873 ~ 33598657 (+) | True | G119922 |
| TU161502 | lncRNA | upstream | 305324 | 33538172 ~ 33562071 (+) | True | G119901 |
| TU161485 | lncRNA | upstream | 351972 | 33514011 ~ 33515423 (+) | False | pkn2a |
| TU161693 | lncRNA | downstream | 105044 | 33975828 ~ 33976887 (+) | True | G120058 |
| TU161694 | lncRNA | downstream | 112213 | 33982997 ~ 33983403 (+) | True | G120059 |
| TU161697 | lncRNA | downstream | 116648 | 33987432 ~ 33987907 (+) | True | G120062 |
| TU161705 | lncRNA | downstream | 141894 | 34012678 ~ 34012883 (+) | True | G120069 |
| TU161700 | lncRNA | downstream | 171768 | 34042552 ~ 34111347 (+) | True | G120064 |
| XM_039815082.1 | mRNA | upstream | 16039 | 33810968 ~ 33851356 (+) | False | gng12a |
| XM_039815083.1 | mRNA | upstream | 16039 | 33810968 ~ 33851356 (+) | False | gng12a |
| XM_039815084.1 | mRNA | upstream | 16039 | 33811246 ~ 33851356 (+) | False | gng12a |
| XM_039815080.1 | mRNA | upstream | 57719 | 33768879 ~ 33809676 (+) | True | wls |
| XM_039816183.1 | mRNA | downstream | 58283 | 33929067 ~ 33938778 (+) | False | dmbx1a |
| XM_039816181.1 | mRNA | downstream | 58283 | 33929067 ~ 33938778 (+) | True | dmbx1a |
| XM_039816182.1 | mRNA | downstream | 58283 | 33929067 ~ 33938778 (+) | False | dmbx1a |
| XM_039816185.1 | mRNA | downstream | 84382 | 33955166 ~ 33957389 (+) | False | LOC120568585 |
| XM_039816302.1 | mRNA | downstream | 134111 | 34004895 ~ 34007251 (+) | True | ptger4c |
| TU161565 | other | upstream | 7548 | 33858542 ~ 33859847 (+) | True | G119957 |
| unassigned_transcript_564 | other | upstream | 465073 | 33402251 ~ 33402322 (+) | True | trnap-ugg_4 |
| TU161343 | other | upstream | 559531 | 33304822 ~ 33307864 (+) | True | G119769 |
| TU161294 | other | upstream | 701295 | 33163916 ~ 33166100 (+) | True | LOC120568463 |
| XR_005640727.1 | other | upstream | 820261 | 32989790 ~ 33047134 (+) | False | tep1 |
| TU161681 | other | downstream | 84399 | 33955183 ~ 33957504 (+) | True | LOC120568585 |
| TU161769 | other | downstream | 293319 | 34164103 ~ 34165846 (+) | False | mrpl34 |
| TU161873 | other | downstream | 446364 | 34317148 ~ 34317766 (+) | True | G120200 |
| TU161901 | other | downstream | 530017 | 34400801 ~ 34404001 (+) | False | rps28 |
| TU161934 | other | downstream | 582938 | 34453722 ~ 34457611 (+) | True | G120249 |
