RNA id: unassigned_transcript_513



Basic Information


Item Value
RNA id unassigned_transcript_513
length 82
RNA type tRNA
GC content 0.59
exon number 1
gene id trnas-cga_3
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6209832 ~ 6209913 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCTGTGATGGCCGAGAGGTTAAGCGCTTGGACTCGAAATCCAATGGGGTTTCCCCGCGCAGGTTCAAACCCTGCTCACAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151527 lncRNA downstream 93688 6113462 ~ 6116144 (-) True G112381
TU151530 lncRNA downstream 104015 6082641 ~ 6105817 (-) False G112383
TU151529 lncRNA downstream 104015 6104799 ~ 6105817 (-) True G112383
TU151484 lncRNA downstream 216059 5922747 ~ 5993773 (-) True G112352
TU151460 lncRNA downstream 418069 5774413 ~ 5791763 (-) True G112332
TU151626 lncRNA upstream 137422 6347335 ~ 6347853 (-) True G112453
TU151627 lncRNA upstream 137422 6347335 ~ 6347853 (-) False G112453
TU151638 lncRNA upstream 146885 6356798 ~ 6357990 (-) True G112460
TU151639 lncRNA upstream 148166 6358079 ~ 6359329 (-) True G112461
TU151640 lncRNA upstream 149559 6359472 ~ 6359952 (-) True G112462
XM_039815076.1 mRNA downstream 30946 6172281 ~ 6178886 (-) True LOC120567959
XM_039815074.1 mRNA downstream 31255 6175573 ~ 6178577 (-) True LOC120567958
XM_039815075.1 mRNA downstream 31255 6176732 ~ 6178577 (-) False LOC120567958
XM_039815073.1 mRNA downstream 40719 6165148 ~ 6169113 (-) True LOC120567957
XM_039816327.1 mRNA downstream 130995 6077151 ~ 6078837 (-) True LOC120568672
XM_039816825.1 mRNA upstream 46387 6256300 ~ 6283498 (-) True LOC120569024
XM_039816826.1 mRNA upstream 46387 6256300 ~ 6283497 (-) False LOC120569024
XM_039816827.1 mRNA upstream 46387 6256300 ~ 6283497 (-) False LOC120569024
XM_039816828.1 mRNA upstream 46387 6256300 ~ 6283496 (-) False LOC120569024
XM_039816824.1 mRNA upstream 74247 6284160 ~ 6299971 (-) True gtpbp4
unassigned_transcript_512 other downstream 1261 6208490 ~ 6208571 (-) True trnas-cga_2
unassigned_transcript_511 other downstream 3425 6206326 ~ 6206407 (-) True trnas-cga_1
unassigned_transcript_510 other downstream 4359 6205392 ~ 6205473 (-) True trnas-cga
unassigned_transcript_509 other downstream 9089 6200662 ~ 6200743 (-) True trnas-uga_1
XR_005640645.1 other downstream 34281 6174556 ~ 6175551 (-) False LOC120567959
unassigned_transcript_514 other upstream 497 6210410 ~ 6210486 (-) True trnas-uga_2
unassigned_transcript_515 other upstream 1631 6211544 ~ 6211625 (-) True trnas-uga_3
unassigned_transcript_516 other upstream 2200 6212113 ~ 6212194 (-) True trnas-uga_4
unassigned_transcript_517 other upstream 2772 6212685 ~ 6212766 (-) True trnas-uga_5
unassigned_transcript_518 other upstream 3138 6213051 ~ 6213132 (-) True trnas-cga_4