RNA id: unassigned_transcript_527



Basic Information


Item Value
RNA id unassigned_transcript_527
length 82
RNA type tRNA
GC content 0.54
exon number 1
gene id trnas-uga_14
representative True

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6218174 ~ 6218255 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GCTGTgatggccgagtggttaaggcgttGGACTTGAAATCCAATGGGGTTTCCCCTCGTAGGTTCAAACCCTACTCACAGCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU151527 lncRNA downstream 102030 6113462 ~ 6116144 (-) True G112381
TU151530 lncRNA downstream 112357 6082641 ~ 6105817 (-) False G112383
TU151529 lncRNA downstream 112357 6104799 ~ 6105817 (-) True G112383
TU151484 lncRNA downstream 224401 5922747 ~ 5993773 (-) True G112352
TU151460 lncRNA downstream 426411 5774413 ~ 5791763 (-) True G112332
TU151626 lncRNA upstream 129080 6347335 ~ 6347853 (-) True G112453
TU151627 lncRNA upstream 129080 6347335 ~ 6347853 (-) False G112453
TU151638 lncRNA upstream 138543 6356798 ~ 6357990 (-) True G112460
TU151639 lncRNA upstream 139824 6358079 ~ 6359329 (-) True G112461
TU151640 lncRNA upstream 141217 6359472 ~ 6359952 (-) True G112462
XM_039815076.1 mRNA downstream 39288 6172281 ~ 6178886 (-) True LOC120567959
XM_039815074.1 mRNA downstream 39597 6175573 ~ 6178577 (-) True LOC120567958
XM_039815075.1 mRNA downstream 39597 6176732 ~ 6178577 (-) False LOC120567958
XM_039815073.1 mRNA downstream 49061 6165148 ~ 6169113 (-) True LOC120567957
XM_039816327.1 mRNA downstream 139337 6077151 ~ 6078837 (-) True LOC120568672
XM_039816825.1 mRNA upstream 38045 6256300 ~ 6283498 (-) True LOC120569024
XM_039816826.1 mRNA upstream 38045 6256300 ~ 6283497 (-) False LOC120569024
XM_039816827.1 mRNA upstream 38045 6256300 ~ 6283497 (-) False LOC120569024
XM_039816828.1 mRNA upstream 38045 6256300 ~ 6283496 (-) False LOC120569024
XM_039816824.1 mRNA upstream 65905 6284160 ~ 6299971 (-) True gtpbp4
unassigned_transcript_526 other downstream 491 6217602 ~ 6217683 (-) True trnas-uga_13
unassigned_transcript_525 other downstream 1062 6217031 ~ 6217112 (-) True trnas-uga_12
unassigned_transcript_524 other downstream 1634 6216459 ~ 6216540 (-) True trnas-uga_11
unassigned_transcript_523 other downstream 2196 6215897 ~ 6215978 (-) True trnas-uga_10
unassigned_transcript_522 other downstream 2768 6215325 ~ 6215406 (-) True trnas-uga_9
unassigned_transcript_528 other upstream 476 6218731 ~ 6218812 (-) True trnas-uga_15
unassigned_transcript_529 other upstream 1050 6219305 ~ 6219386 (-) True trnas-cga_5
unassigned_transcript_530 other upstream 1618 6219873 ~ 6219954 (-) True trnas-uga_16
unassigned_transcript_531 other upstream 2198 6220453 ~ 6220534 (-) True trnas-uga_17
unassigned_transcript_532 other upstream 2761 6221016 ~ 6221097 (-) True trnas-uga_18