RNA id: TU164873


Basic Information

Item Value
RNA id TU164873
length 245
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G122584
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 7136477 ~ 7136721 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGAAATTCTTTTGTAACCTTGGCCAGATCTGTGCCTTgccacaattctgtctctgagctccttgggcagttccttcgacctcatgattctcatttgctctgacatgcactgtgagctgtaaggtcttatatagacaggtgtgtgcctttcctaatcaagtccaatcagtttaattaaacacagcaggactccaatgaaggagtagaaccatctcaaggaggatcagaagaaatggacagcatgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU164834 lncRNA upstream 90684 6996342 ~ 7045793 (+) True G122556
TU164839 lncRNA upstream 90684 6996342 ~ 7045793 (+) False G122556
TU164705 lncRNA upstream 456674 6677906 ~ 6679803 (+) True G122474
TU164706 lncRNA upstream 464830 6670455 ~ 6671647 (+) False G122474
XR_005640912.1 lncRNA upstream 481150 6654915 ~ 6655327 (+) True LOC120569613
TU164875 lncRNA downstream 2327 7139048 ~ 7141280 (+) True G122585
TU164963 lncRNA downstream 190365 7327086 ~ 7327327 (+) True G122645
TU164964 lncRNA downstream 209286 7346007 ~ 7346239 (+) True G122646
TU164965 lncRNA downstream 220415 7357136 ~ 7357470 (+) True G122647
TU164967 lncRNA downstream 255031 7391752 ~ 7392099 (+) True G122649
XM_039817561.1 mRNA upstream 92426 7005567 ~ 7044051 (+) True obsl1b
XM_039817562.1 mRNA upstream 92426 7005568 ~ 7044051 (+) False obsl1b
XM_039817563.1 mRNA upstream 92426 7005568 ~ 7044051 (+) False obsl1b
XM_039817564.1 mRNA upstream 92426 7005569 ~ 7044051 (+) False obsl1b
XM_039817565.1 mRNA upstream 92426 7005570 ~ 7044051 (+) False obsl1b
XM_039817836.1 mRNA downstream 757159 7893880 ~ 7926521 (+) False slc39a10
XM_039817838.1 mRNA downstream 757374 7894095 ~ 7926521 (+) False slc39a10
XM_039817839.1 mRNA downstream 760509 7897230 ~ 7926521 (+) True slc39a10
XM_039817837.1 mRNA downstream 766920 7903641 ~ 7926521 (+) False slc39a10
XM_039817705.1 mRNA downstream 933957 8070678 ~ 8077603 (+) True parp9
TU164440 other upstream 1924629 5209133 ~ 5211848 (+) False ybey
TU164412 other upstream 1970579 5164233 ~ 5165898 (+) True G122226
TU164393 other upstream 2066346 5060001 ~ 5070131 (+) True LOC120569936
TU164394 other upstream 2068499 5060001 ~ 5067978 (+) False LOC120569936
TU164284 other upstream 2153498 4974856 ~ 4982979 (+) True fkbp7
TU164880 other downstream 9904 7146625 ~ 7149039 (+) True G122588
TU165208 other downstream 1658732 8795453 ~ 8796746 (+) True G122846
TU165423 other downstream 2783990 9920711 ~ 9924840 (+) False umps
TU165424 other downstream 2790096 9926817 ~ 9928891 (+) False umps
TU165581 other downstream 3470763 10607484 ~ 10618696 (+) False lrp1bb

Expression Profile