Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU164930 |
| length | 584 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | LOC120569626 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 7014183 ~ 7035277 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU164903 | lncRNA | downstream | 198989 | 6782493 ~ 6823002 (-) | False | pcbp3 |
| TU164904 | lncRNA | downstream | 294281 | 6726720 ~ 6727710 (-) | True | G122604 |
| TU164778 | lncRNA | downstream | 336556 | 6685226 ~ 6685435 (-) | True | G122508 |
| TU164751 | lncRNA | downstream | 340020 | 6678392 ~ 6681971 (-) | True | LOC120569614 |
| TU164758 | lncRNA | downstream | 372307 | 6640881 ~ 6649684 (-) | False | LOC120569614 |
| TU164962 | lncRNA | upstream | 110632 | 7136478 ~ 7136728 (-) | True | G122644 |
| TU164974 | lncRNA | upstream | 539368 | 7565214 ~ 7565430 (-) | True | G122656 |
| TU164978 | lncRNA | upstream | 597576 | 7623422 ~ 7624043 (-) | True | G122660 |
| TU164999 | lncRNA | upstream | 803086 | 7828932 ~ 7913318 (-) | True | G122677 |
| TU165146 | lncRNA | upstream | 1166078 | 8191924 ~ 8192187 (-) | True | G122802 |
| XM_039817583.1 | mRNA | downstream | 61308 | 6894190 ~ 6960683 (-) | True | col18a1a |
| XM_039817571.1 | mRNA | downstream | 150779 | 6782446 ~ 6871212 (-) | True | pcbp3 |
| XM_039817568.1 | mRNA | upstream | 18029 | 7043875 ~ 7073377 (-) | False | LOC120569618 |
| XM_039817567.1 | mRNA | upstream | 18029 | 7043875 ~ 7060118 (-) | True | LOC120569618 |
| XM_039818450.1 | mRNA | upstream | 49956 | 7075802 ~ 7078581 (-) | True | LOC120570216 |
| XM_039818074.1 | mRNA | upstream | 53115 | 7078961 ~ 7125976 (-) | False | spegb |
| XM_039818073.1 | mRNA | upstream | 53115 | 7078961 ~ 7125976 (-) | True | spegb |
| XR_005640916.1 | other | downstream | 339997 | 6670443 ~ 6681994 (-) | False | LOC120569614 |
| unassigned_transcript_605 | other | upstream | 118281 | 7144127 ~ 7144208 (-) | True | trnas-cga_8 |
| unassigned_transcript_606 | other | upstream | 153231 | 7179077 ~ 7179158 (-) | True | trnas-aga_9 |
| TU164950 | other | upstream | 156099 | 7181945 ~ 7317593 (-) | False | tmeff2a |
| XR_005640909.1 | other | upstream | 1772189 | 8798035 ~ 8803090 (-) | False | ccnt2a |
| TU165255 | other | upstream | 1973616 | 8999462 ~ 9000123 (-) | True | G122878 |
