RNA id: TU166600



Basic Information


Item Value
RNA id TU166600
length 771
RNA type TUCP
GC content 0.52
exon number 7
gene id G123886
representative False

Chromosome Information


Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 14784561 ~ 14794497 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cagcaacaACACACCAAGGCTCTTTGCGATACACAATAAAATAGGGCAATGCTTATGCATGTTTGGGGCAGTGCATGGGTGGGTGAAATAACGTGTTAATGTGTTAAAGTAAAGAGAAGAAGGATTAACTCACCGTTGGGTTTAGGTTTGTCTGCATCTCCTATGGCGCCAGCAGCATGtgCCCCAGAACGGCTCCGTCCTTGGCTGTTCACTGCATTCTCTTCTCCTGCCAGAGCATCTTCCAGGTTAAATCCTACATCTGCATTCACCTTAGCAACAATATCTTCTGTTATTGTAGGGACAGGGACGTCTACTTGTGGTACTACATTTTCATCACCAGCTGGATCAGTAAGTGTTTCCTCATCTGCTACAGTTGGATCTGCTGCTGGTGTGGCTTCAGGTCCActCTCCTCCTGAGCAGGTGTTGCACCAATGCTTGAGGTAGCTTCCTCCTCTCCATTACCTGTTGGTTCATCAGCCTTTGGATCCTTAACCTCTGCATCAGCTGCAGGCTCTTGTGTTGCAGCTGCTTCTGCCTCAGTGTCTGCTGGTTCTGGTTCCTCAGGTGCAGGTGTCGCTGGTTCTGCGTCTTCAACCGCAGGAGTCACTGGTTCATCGGCTCCATCTTCATGGTCAGCAGCGGGCTCGGGCTCAGGCTCAGTCTCAGTCTCGGGCTCAGGCTCAGTCTCAGTCTTGGGCTCAGGTTCGGCCTCAGGCTCGGCCTCAGGCTCAGTCTCAGTCTTGGGCTCAGGTTCGGCCTCAGGCTCAGGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU166584 lncRNA downstream 54181 14726756 ~ 14730380 (-) True G123878
TU166587 lncRNA downstream 54181 14726756 ~ 14730380 (-) False G123878
TU166578 lncRNA downstream 111180 14673131 ~ 14673381 (-) True G123872
TU166569 lncRNA downstream 136269 14630605 ~ 14648292 (-) False G123868
TU166567 lncRNA downstream 150362 14629743 ~ 14634199 (-) True G123868
TU166611 lncRNA upstream 13608 14803514 ~ 14804332 (-) True G123889
TU166677 lncRNA upstream 149425 14939331 ~ 14939574 (-) True G123948
TU166696 lncRNA upstream 194108 14984014 ~ 14984415 (-) True G123959
TU166768 lncRNA upstream 325824 15115730 ~ 15123454 (-) True G124000
TU166770 lncRNA upstream 326288 15116194 ~ 15123945 (-) True G124001
XM_039818969.1 mRNA downstream 46147 14730941 ~ 14738414 (-) True LOC120570577
XM_039818514.1 mRNA downstream 73799 14673543 ~ 14710762 (-) False tmem198a
XM_039818784.1 mRNA upstream 51393 14841299 ~ 14858737 (-) True LOC120570436
XM_039818785.1 mRNA upstream 51393 14841299 ~ 14854316 (-) False LOC120570436
XM_039818796.1 mRNA upstream 113450 14903356 ~ 14918290 (-) True LOC120570445
XM_039818795.1 mRNA upstream 115198 14905104 ~ 14920649 (-) False LOC120570445
XM_039817871.1 mRNA upstream 153219 14943125 ~ 14956778 (-) False si:dkey-67c22.2
TU166096 other downstream 2164746 12619353 ~ 12619815 (-) True G123481
TU165255 other downstream 5784438 8999462 ~ 9000123 (-) True G122878
XR_005640909.1 other downstream 5981471 8798035 ~ 8803090 (-) False ccnt2a
TU164950 other downstream 7466968 7181945 ~ 7317593 (-) False tmeff2a
unassigned_transcript_606 other downstream 7605403 7179077 ~ 7179158 (-) True trnas-aga_9
TU166697 other upstream 194579 14984485 ~ 14993789 (-) True G123960
unassigned_transcript_607 other upstream 627294 15417200 ~ 15417272 (-) True trnak-uuu_17
TU167157 other upstream 1309372 16099278 ~ 16101593 (-) True G124303
TU167228 other upstream 1588703 16378609 ~ 16380765 (-) False gcgb
TU168094 other upstream 3323204 18113110 ~ 18115089 (-) True LOC120569287

Expression Profile