RNA id: TU166697


Basic Information

Item Value
RNA id TU166697
length 9305
RNA type TUCP
GC content 0.41
exon number 1
gene id G123960
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 14984485 ~ 14993789 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgTAACAAAAATTAACTATGGTGACATGTCCACTAAattctttgattttttttgcattttcacaaCAGTTGTACAGTACTGATATTGATCCTCTGTGACTAGttataaatgataaaaaaacacaacattttatttattaataaggacattaatcaacattttttttatttgtatccgTGTTAGCTAGATGGCTAATTTTCAAATGCAGTCCTTTTGCAAGATGTTTGAAACCAGTGATGTCATACAGAGATTATATCTGTCCTAAGTGAGTAGTAGTTTTAAATGATTACAACATTGCTAAACAACTTTTACAGTTTCATAAAGTAATATATAGTCATAAAAgtttacaaaaaacatttgcattttcATAATAAAAGTATTAATGAGAATAAATTGGTCCTCGAGTcaaaatgtttacaaaatgaaaaacaaaaaatattttacaaaatgctTTGATATTAAGATTTTTTAGAACATATGCATTTAGTGACATATTAATGAGTCTTCAGTAATAAGTAACAAATGAAACAATCTTTTTCATTTCAGAAATCTTATTTTGTTTATAGTATTGTTTCAATATCACAACATGGCTAACAgcatttttaacaaaacatagtcaatatcacaatatcacaacATGGCTAACAgcatttttaacaaaacatagTCAAAACATCTTAAATCCTCTGCTAATGTGACATTTCTGTTTGTCTTGAATCCCTAATTCACATATGCCTCTACTTTACTAAGAAGCTCAGATGCCTTGTCCAGTGCTAACATTTCATTCTCTAATTTGAACCTTTCATTAGGAATGTGGGGAAATGGATGGCAGTTGGGATACTGAGTCTTCTTGGCATCCACTCCCAGCATCTTCAGATTCTCCACAATTTGAGGCAGAACTCTCAGTTGGAGGTTGTAGAGGGAAACTTGTGCGGCAAGGGCTGAAATAGAGCTGCTATTGGGATGTCGACCATCTCTTTTATATTTTGCAGCTATGAGAGATTTTTCCACTGCTTGGTGAATTTTGAAGAGACACCACTCTGTGCTCGCCCCACCAACATCTTTGTGAGCTGCGTTAAGATCACAACGAGCTTGTCTACACCACCGCTGGGCCTCCTCTTTGTTCGGCTTTGGGACATTTTCATTATGGGTCCAAAAGTTGTAGGAATGGTTGTCTCTAGAGAATCTCTCTCTGCCATTTCTGTGATGTCTGGCCTCCTGATTCCAATCCTGATAGAAGTTACTGAAATTTGAGTTACTGAAATTTGAGTTTCCGCTTGGATAGGACGAACCTGCAGTTTTGCCTTTGCTAAGGTCATCAATTTGATTCTTCAAGTATTTGAATGCCTCTGTGGCAAGAAGAGGGCAGTCTGGGTTTTTGTCAGGATGCCATCTAAGGTACAGTCGTTTGATGGCTTTAAGCCTATCCTCCTGAGGAAGAGTCCAGATCTCTGCCAAACATTTGTCGATTTCCATTTTAGCTTCGTCAAGAGAGGCTGGTGAGGATCTCGTAGAGGAGGAACTTGTAGTTGATGGTTTGGAAGAATGTGGCACAGCTCCAGCTAGTGGCACCAGCTCCATGCAAGAAGCTTCGGCAGACGTGCAAGTCCTCCCTTCAGATTCTGGCTTCTTTTGTCGCTTAAACTGATACAGGTCAAGACAACTGACTTCAATTGGCTCATCTTCTCCAATTTCTATTTTGTATCTTTGTGAATATGGTCCAGAGTGCAGAGGCAGTTTTTCAACAATAACTGCATAAACAAACTTGTTGTTAGTGCTGTAGCCAACATATTCCCCCTCTTCAAAGTTATTGAGGATGTTCATGTCTAAGGAATCAAACCATTCCTCTGGAATTTGTGTTCCAGGGGCTGGTGGATTGCAGGGGAAGCTTTTAGTTTCAGCACTGTCATGGATCCCACTGTTAGCCAGACATTTCTGAACATCTTGCAGACTGTCACACACGAGAAGATGTCCAAGGACTAGGAGGTAATGTGATGCCATTCTGTTACCTAAAAGAGCATTAATCTCCTTTGTTAATGTCATGTTGATGCCACTTATTACCATGGGAGCCatgtcattgttgtgtttcaaGTAAAAGACGCAACTTTGTTGCCCTtgtttgacaaaaacattggtttCAGTGGCAGTTTTGTGTAGTGGTTGTTCATTCACCCAAAGCTTAGTTTTCAGACTTTTGCAGCAGATAATCTCAATACTCCCAAATGTCTTCTTGCACATGTCAGTAGCATCTTCTTGTGTTATTTCTCCCTGAGACTGCTCTCTGATAAGACAAATCAGTCCATGTGCAAATGCTTCTGAGGACAGATGTTTGTTAAACCATCCACTAAATTCACAGTCAGTCCCAAACTCACAAAGCTGCATGTGTGATTCCACTACTTTCTCCTCCGTGAACTGAGACAGCATTATAGGCTTAAATTTCTGAGGCAGCAATTGCAGCAACCGATGATGCTCATAAATGTCACGGCCCAAATGACATTCACCGAGTTTCTCCAGCAACAGGAACCTATTCTCCAGCGCTTCTTCCAACCTTTTGGTCTCAAACGTTGTATCGTTGTAGTGGAGTGTGCACGATGCGTATAATTTACCATCTACTGCAGGAAGATACAAAGTCTTTACATCGTCAACAAGAGGCTGGTTTCGTTGAGTTTTGATTAACATGAAAAGCTGCTCAACAGCACGTTTCACAGTTTTCTGTTGGTTTGGGTTAGGTTGGGGTTTATCACTGGAATCAGCATAAACTGCTGCTAGAACATTACAATACTGCTCTGCAGTAGGTTTGTCCTTTACACCAATTTTCTTGAAGAACTCTGCAAACATGACATCTTGTGGAGAAATGTTGTACAAATACGGTCTGAACTCATGGCCATGGGGGAGTGAAAAAGTAGTATCATCAGTCCTCACAAGTTCTTTGTCTTTTTCAACCAACACAACAGGAAGACCAGCTAGTGGTTGGCCTTTAAACCCGTTTGCTTGCAGGTAGGCATACGCACTTCGAAACACATTAGCACGGGTTTTAATCAACTGGTCAGATTTACAGGGCGACTGACAGATGTTGCTcatgttactggttacacagTGTGAAGGTGGTTGTTCATGCACTCCTGCATCTTTCAGCATTGGCATGAGCTTCTGTGACTTATAAACCGGTAAATGTATAATTGGCATTGAAGACCAAATCAGCTCTTGATGCTTAGGATCACTTTCTATCAAAGATCCtcttattttaacagtgtttctctcaGCAGCAAATGGTTGGTGAAAGTTGCACAGTTCTTTTCGAATTTTCACAGGAAAAATGAAATTGATGTCAGCTATGCTCTCCAGCAATCTTTCCTCGTTGTTTTTGTCGTTGCTCACGATATTCAAGGCTGCTTTGAAAATTGAAGATGATTTCAATTTCAACTCTTCAAGTTGACCATTTCCTTTTGCTTCTGATTCTAACTGTTGTGCAAAATTTATGATGTCATCTTTTGACACGACATGCTTCATTCCAAGGTCTCTGAGCAACTCTTTTGGTCTTTCCGTTTGTAGATTTTCTTCACACAACTGAGTCCAAAATCTCTCAGGCACAAATCTCTCTTGGGGCAACATTTTCTTGTACAGATCCACACTCTTGTCAAAGTAGTATGATACAGTCTCCAATCTGCCTTGGGAACTGCGAATCAATTTCACTGTTTTCATTGAGGAGATAATTTTGTCCTTATTCTGAAAATAATTGAACAGTGGTGACAGTAACAGTTTGAGGCACTGAAGCATCTGaatctctgtgagtgtgtgtacaaCGGGCAGAATGAACTTCATGAAATAGTCCAAATCAGTCAGGATTTGGATTTTCAATGTTTCTGACAGACTGCAGTTATCTGGATTGCATTGGAGAAAAATGCTGTTGCTGTCGGCCAGGTTGAACAAATCAGGAAATGTCTTTGAATAACTGCTGTTGAGGACAAATACCTCTTTAGGTCCATCAATCCTTACTCGGTTACCATGTATTGTTTCAAATAATGGCAAGGATTTGAGCTTTCTCTGATACTCTTGTTTGTCTTTGGACTTGGATTCTCCAGACTGCAGGAAACGCTGAAGCTCTTTCATCTCATTAATGGATAGCTGGGGGAACTCTGAGTGGTTAATGTTGTAGACCTGGTCCAACACAGCGCTTGTATCATTCACATGCATAAGTTCAGGGTGTAGAAGTGAACGTAAATGTCGGTCTACATGTATGTCAGTAAAGAATACATTGTCAAGCTTCATAAAACCAAGTTTAAAGAGGATGCCCGATATATCCATCTCGGAGGAGAACTCAATCACACTCGGCATGCCTTTCATTGTTTGCAGAAGGTGCTTGTTCTTTAACCTTGGACACACAACTGGTAAAATGGAGCAGTCACTGAAGAGCTTCCTCACATCACTTAATGTCAGACTTTGTTCATCACCACTAGATGTTGCAGGTTTAATTTCGCTCATTAAGAACTTCCAAAGTGATTTCAGCCACTTCAACATTGACTCATTTGGGACATGAAGACCACTGTGTCGATTAACTTCACAGTCCTGAAGAAGCTGCTGAATTAAAGGTTTCAGATATTTCACTGCACAGGGAACTGTCAAACGTTTGACAAGGTTTAAACTTTGTAAACATTGTAGAGAAATGTGGTCACTGTTGGtcagataatctgcaaattgGTCCTCGTAGCCAGAGAACAGACTCTCATATCTTGTTATCAGCTTGGGAGAGTTGGAGTTGAAAACTCTCAAAACTTTATCTCTTGTGAGAAGAAGTGGAAGCCCATTCAGTAAACTGGAATTGGTGATCTTTTTCGGGTCTAAATCTTTTAAGCAGAAACTCAAGAGCTTTGAACATCTCGTTTCATCTCTGATTAGAGTGGCAGTTATTGGCAGCGGTAACTCTTCATCTGTTTGGGTTGGGTCATTGAGGGGTTTTTCTCTCAGGAAAGCCTGCACAGTTGAAGCATTTACATCTTTTACTTTAATGTCAGCGGCTCTGAAACTTTTCCAAACTTTTTGCATGAAAGAAGGAACCAATTTCATTCCAAGATCTTCCAAAATGGGATTCATCTCATCGCTTACTGAATGTGTCAGGTAAGGTGCCTTTGTTGTTTCAGTTTCTCCGACATTACACCAGTCAAAAGAGTATTCCTTAAATTCTCTGACTGCAGTTACACGTGTTGAAGTCCTCATCACTGGAATCAGATTAAGGCCTCTTTCTTTGATTGATCTGTATACCTCATGTATCATTCCATGCCAATCCTGGCCAACATCTTTGGACACAGTGGGCCAAAAACACAAGTATGAGCTACTGAAGCATGACTCAATACATAAAAAAGGGACTTTCTTTTCTGCAATGCTACGGCTGATGTAATGAAGGAGATCCGCATACAGTGGAGCAATGACATTCTGTTTCAAAGATTCATTCCAGTTAGATTTTTGACTTTGCCCATCTTCTTTCCAAAGGCTTCTTCTGGCAGAATCTACCTCAAAGTTTGCATTGACATGCACTGGCAGTCCAGTTCTCCCTGGCAAAGGAAGTGAACAAAAGGCTTCTCCAATAAAATCCATAGGTCTGAATAATTCTGGATTCAAACTCTTTGAGCTCACACGAGCCGCTATTGCTGCTTGGGGAAGTTTGTCTGATAGTTCTCCATCACCACTGTTTTTGAATGAGCCAAACTGCTCTGCAGTGATCCATCTAGTTTGTCTTTTATCGGAGGTTGAAATCATGGTTCCATAAATGGCCTTGTCTGGCATTATTGGTTTGTCAGATTGCAGCGCATGTTGTTGAAGTTTTACAAAAGCATCTTTTACTTCTCTGCATTTCTGTGGAATACTTTTTTCAACCATGAAGATGGTTTCGAGTTTCCCTGAATGTTCACTGATTTCATGGACTTCTATTTTGCAGATGTTTTTCAGAAACAGAATTAGTCCTTCAGGATCTTCAGAGAGGGCAGAGCATAGTTCTTCCATGTCATGGTCAGTGACTCCCTGCTTTGATATTTTAGAGCTGTTTGCCATGGTACCCATCCTTAGAGGTAATCTGAACATGGTGCCCTCTTTAAGAGAAAATTTGTCAGGAAGAAAGGATTTGTAGACATCGATGTACATGTTCTTGAAAGTGTCAGCCAGTTTATAGCCAGTGCCAGCTGGTGGTTTGTCTGATTGACTTTCAATGTATTTTTGATTAGGATCAGAAATGCAGAGTAGTTTATCTCCAGTGAGGATTGAGGGGCAGTCAGTCAGATGGTAAACAGAGTTGAATCCTACTCCGTATTTTCCTATCTTCCCTGGAGAGTTGTGCTTTCCTCCTTCTCCCAGCTGTTGAATGCCAGCCAGGTCAGCATCAGAAAACACTTTGTTGTTGAACACACACAGTGCTGGACCTTGCAGTTGGTTCCATTTCTTCCCAAAGGTTTTTTCTTTGCCATGCTGTCGTTTGTCCCAAACAAAGTGAATTTCTGTTGCCTCTGCATCATCAGCATTTTGGATAAGCTCTTTAAGGATATCCTTCTTCGATGGATAGGctgaaattatgtttttaattcGAACAGTTAGTTGTTCCTGCTGTTCAAACTGAAAAGCAAATGGTGAAATGTTCTCAACTACGTGGTTTTGCAGGGTATGATGCCTGGTAGTTTTGATTCTGAAGTGGCGAGCCACAACACGTGAGATATTCTCGTGACATAATGGGACATCTGAAGCGACTGGCATCCATGGGCTGTCGTTGTAAAACATCTCACATGCAGGTTGTAAAACACCATGTTTGTTGGGTATCAGAAAGTCACCCGTTATTTTCTCTTTGGCCTCATATATGGCTGTTAAAATTGTGAGGCAAATTGATAGGGCACTCTTTGGTAGGGTCTTGTTACCATGTTGAGAGTGCAATTCCTGAAGCACAGTTGAAAACTGACTGCttgtaaaacatttttcaacacCTACACTTTCCCAGAGGCTCCTGAAACCAGTGAAGGCAGGTGGAAGTAAATAGAGATAGGGTTTTGCTTCAAATTGCTCATTTTCAGCTACACGATTCACATTTACAAATGTGCTGCCAACAAGAATGAATGGGAATGAATTTGCCCTTTGTGAAATTAAAGTGGAATCCCCAGAATCACTGAGACACTGATTCAGAAACTTATAGCATTCATATGCTATAGTGTGAAGCATTGATCGGTCAATGGATTGAGATTGCTCACATGCTTCTTGCAGCTGCTGAAGCACTTGCTCAGGACTTGGACTGTGATGAACTCCCAACATTTGCAGGACTGGATTAGCATTGTGTATTCTCAGATTGGTATGATCCAGCATGTGTTGTGTCATGTTAACAAGTGGGGAGCATTTGTCACTAAAAATATCAGTGGGTCTTCTAAGtgttgcatttttttccctttttgtaTCACCGGGGGAAAATGCTGGGAGAAATTCAGTCATTCTCAGTGTTTCCCAGTGGAGAGAGTCTtcatcattactgtgattgtTCATAAGTTCAAGAAGACAATTCAAATGCCCATATGCTTTCTTTTTGTCAGTGCTCCAGGTTTTGGGGATTGTGCCTGCTTTCTCTGTGATGTCTTCCAATGGGAGATGATCATTTGCCATTCCAAGTTCCAACAAGCGTTTAATCCTTTTGGGCGAGCAAAAGTCATCTTTGGTACCACCAAGCAAGCGTCCTTCTTCTGGTTCAAAAAGACAGGCCACTTTTCCTGACGGATTCACAAGTTTCCTGATATGCTGCAGCTGTCCGCCTTTTGTGGGGATGCATGGATAGCAGACCAGTAGCTTGTCGATTTCTTTGATATTAAGGTCAATAGCATGCAGCACAAGAGCATCTCTACTCTTAGGGTCCATGGTACCAAGGTTGTTAAACACTGCTTCTTGGTAAAACTCGTCCCAGTTCCATGTTCTGTTCTGTAAAACCTTCTCTAGGTCAGACTGTTTGAAGCTATTTCTCACCCACAGTGGAAGAGGAACAACATAGTTGGGTGCCTTAACATGTTTCTTGCATACCTGCATTGCAAGTGCACTGATGTCTTTATCCTCTTCGATGCTCTCATGTAGAAATATGGCACTGTTCATTGAGCACCAGTGTTCTCCATCACTAAAGAGCTCTGGGCCATTGGAGTGCTGAGCAATGGCGGAGTACAATGCATCTACCAAAGGCTTGAAAGCTTCACTCACTTTCTCTCTATCAGGCCAAAAGGTGTGATAACAGTAAGTTTCCAGTTGCTTGTTTTCAGACATTTTCTTTAGTGCCCCAAGTGCAGTAACATATGCCGTCACTACAGGATCCTGAAGAAGGGCTTTGTTCCAGTCACGTTTCACCCCACTCTCCCACAGACCTTTTCGGTTGCTTGTCACAGCAAATGTTCCATTTACATTAACTGGAAGACCTGTTTTAatggaaagaggaagaaagcaAAAGGCCTGTCCAACAAGATCTGTTTGTAATGAGGCCAGTTTCCCAGTTTCTGGATCATTTTGCAAAGGCACAGCAATCCCCCCGATGGGCAGAGAGAACTTTGCTTTACTGTTTTCTTGACGGGCCATTTGCAAAGACTGATGTGTCCCAAAGCAGTTGTACAGCAGCCAGGGCTGGACTTCAGTTACACCAGATTGCTGACTGGTTATTTGGACAATGTTGACTGTGCAGCAGTCAATGACCTCTTTGCATTTCCCATCAAGTTTCATCAATGACTTCTCAGCTTGATGCTGCTTTGACACATTGGTTTCATCAGGAATCCTCATTGTACTCACAGTGGTTTTGGAGAGAGTGAGAACGGTTTTTATTTCGTCATCTCTTGGTGGAGTTGATACATCGCTTGAGATACTTTGTAGTGATAATGTATTGATGTTCTTCAAAAACAGCAGGTGAGTTTTTGAATCGTTAGTAAAGTGCTGTTGAAAAGTGATGATGTTGTGTTTGTGATACACCTTTGCACTTATTTCTGACTTGAGAGCCTCTTCCTCAGTTCGAAAAGGGAGTTTGATCAGAGTGCCCGGATAGGGTTCAGGGGGGCTTTTTCTGCTGAAATTACAATCAAAGATGCGTTCATATGGTCCAAACTGACCAGGAAACCAATGAAAAAGCCGTTGCTGAGAGAGATCCAGCTTGATTCCCGggtttgttttatgtttgatgtGTTTCTTTAGGTGAGTTACATTTGGATCAAGTATGAGAAGACTGCTGCCACTGAGGATAGAAGGAACATCTGTCACATGATACACAGTATTGAATCCAAGTCCAAACTTTCCAATTTTTTCCAACttgttttcctttg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU166696 lncRNA downstream 70 14984014 ~ 14984415 (-) True G123959
TU166677 lncRNA downstream 44911 14939331 ~ 14939574 (-) True G123948
TU166611 lncRNA downstream 180153 14803514 ~ 14804332 (-) True G123889
TU166584 lncRNA downstream 254105 14726756 ~ 14730380 (-) True G123878
TU166587 lncRNA downstream 254105 14726756 ~ 14730380 (-) False G123878
TU166768 lncRNA upstream 121941 15115730 ~ 15123454 (-) True G124000
TU166770 lncRNA upstream 122405 15116194 ~ 15123945 (-) True G124001
TU166795 lncRNA upstream 184529 15178318 ~ 15196218 (-) True G124014
TU166949 lncRNA upstream 481469 15475258 ~ 15476148 (-) True G124136
TU166959 lncRNA upstream 508959 15502748 ~ 15504712 (-) True G124146
XM_039818789.1 mRNA downstream 10577 14969526 ~ 14973908 (-) True LOC120570440
XM_039817871.1 mRNA downstream 27707 14943125 ~ 14956778 (-) False si:dkey-67c22.2
XM_039817870.1 mRNA downstream 29000 14943125 ~ 14955485 (-) True si:dkey-67c22.2
XM_039818795.1 mRNA downstream 63836 14905104 ~ 14920649 (-) False LOC120570445
XM_039818796.1 mRNA downstream 66195 14903356 ~ 14918290 (-) True LOC120570445
XM_039818097.1 mRNA upstream 2700 14996489 ~ 15078401 (-) False dip2a
XM_039818092.1 mRNA upstream 2700 14996489 ~ 15078401 (-) False dip2a
XM_039818091.1 mRNA upstream 2700 14996489 ~ 15078401 (-) False dip2a
XM_039818088.1 mRNA upstream 2700 14996489 ~ 15078401 (-) False dip2a
XM_039818089.1 mRNA upstream 2700 14996489 ~ 15078401 (-) False dip2a
TU166598 other downstream 189988 14784561 ~ 14794497 (-) True G123886
TU166600 other downstream 194579 14784561 ~ 14789906 (-) False G123886
TU166096 other downstream 2364670 12619353 ~ 12619815 (-) True G123481
TU165255 other downstream 5984362 8999462 ~ 9000123 (-) True G122878
XR_005640909.1 other downstream 6181395 8798035 ~ 8803090 (-) False ccnt2a
unassigned_transcript_607 other upstream 423411 15417200 ~ 15417272 (-) True trnak-uuu_17
TU167157 other upstream 1105489 16099278 ~ 16101593 (-) True G124303
TU167228 other upstream 1384820 16378609 ~ 16380765 (-) False gcgb
TU168094 other upstream 3119321 18113110 ~ 18115089 (-) True LOC120569287
TU168092 other upstream 3119721 18113510 ~ 18115089 (-) False LOC120569287

Expression Profile