Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU168387 |
| length | 1197 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC120569517 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 19108300 ~ 19113781 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0022402 | cell cycle process | biological_process |
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0007049 | cell cycle | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU168374 | lncRNA | downstream | 17521 | 19089502 ~ 19090779 (-) | True | G125178 |
| TU168365 | lncRNA | downstream | 31534 | 19073235 ~ 19076766 (-) | True | G125173 |
| TU168281 | lncRNA | downstream | 260931 | 18845832 ~ 18847369 (-) | True | G125116 |
| TU168278 | lncRNA | downstream | 263005 | 18844546 ~ 18845295 (-) | True | G125113 |
| TU168277 | lncRNA | downstream | 263962 | 18844100 ~ 18844338 (-) | True | G125112 |
| TU168446 | lncRNA | upstream | 89962 | 19201746 ~ 19205941 (-) | True | G125227 |
| TU168460 | lncRNA | upstream | 120208 | 19231992 ~ 19233621 (-) | False | tbl1x |
| TU168536 | lncRNA | upstream | 320280 | 19432064 ~ 19432431 (-) | True | G125293 |
| TU168537 | lncRNA | upstream | 323858 | 19435642 ~ 19436047 (-) | True | G125294 |
| TU168538 | lncRNA | upstream | 327642 | 19439426 ~ 19439851 (-) | True | G125295 |
| XM_039818893.1 | mRNA | downstream | 75111 | 19010827 ~ 19033189 (-) | True | LOC120570505 |
| XM_039818894.1 | mRNA | downstream | 84293 | 19010827 ~ 19024007 (-) | False | LOC120570505 |
| XM_039818243.1 | mRNA | downstream | 111316 | 18977212 ~ 18996984 (-) | False | mid1 |
| XM_039817378.1 | mRNA | upstream | 4791 | 19116575 ~ 19118587 (-) | True | trappc2 |
| XM_039817373.1 | mRNA | upstream | 16440 | 19128224 ~ 19158065 (-) | True | gpm6bb |
| XM_039817372.1 | mRNA | upstream | 16440 | 19128224 ~ 19142836 (-) | False | gpm6bb |
| XM_039817374.1 | mRNA | upstream | 19141 | 19130925 ~ 19142832 (-) | False | gpm6bb |
| XM_039819101.1 | mRNA | upstream | 77399 | 19189183 ~ 19195845 (-) | True | fancb |
| TU168242 | other | downstream | 403623 | 18703095 ~ 18704677 (-) | False | G125090 |
| TU168244 | other | downstream | 403623 | 18703129 ~ 18704677 (-) | False | G125090 |
| TU168243 | other | downstream | 403748 | 18701648 ~ 18704552 (-) | True | G125090 |
| TU168240 | other | downstream | 408498 | 18695480 ~ 18699802 (-) | True | G125089 |
| TU168581 | other | upstream | 484145 | 19595929 ~ 19597521 (-) | True | G125326 |
| XR_005640980.1 | other | upstream | 641259 | 19753043 ~ 19768586 (-) | False | si:ch211-214p13.3 |
| TU168717 | other | upstream | 678747 | 19790531 ~ 19796038 (-) | False | LOC120570223 |
| TU168785 | other | upstream | 809570 | 19921354 ~ 19923694 (-) | False | si:ch211-214p13.7 |
| TU168944 | other | upstream | 1347378 | 20459162 ~ 20461629 (-) | True | G125619 |
