RNA id: TU168751



Basic Information


Item Value
RNA id TU168751
length 264
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G125458
representative True

Chromosome Information


Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19897667 ~ 19897930 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATTTGGTCAGAATTTCAGTGTGTCACATacatgcaaaactaatgacattcccatcagcttcATCTTTACTTTGGGTTTAGTGCTAATTCGCAAATGTTAGCAGGCTAAGAGGCTAAACTAAGATGGCGAACATTGTAAACATTAGACTTGCTAGACATCAGCATGTTCACGTTGTCATTGGTAGCATGCGGACGTTAGGATTTAGCTAAAGGCACAGCggcgctttgagctaaatgctaaatacAGCCTCACAGCGCTGCTATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168723 lncRNA downstream 37430 19817239 ~ 19860237 (-) True G125434
TU168724 lncRNA downstream 37430 19820568 ~ 19860237 (-) False G125434
TU168725 lncRNA downstream 37430 19822770 ~ 19860237 (-) False G125434
TU168720 lncRNA downstream 73263 19823744 ~ 19824404 (-) True G125432
TU168715 lncRNA downstream 105523 19790218 ~ 19792144 (-) False LOC120570223
TU168752 lncRNA upstream 72 19898002 ~ 19898382 (-) True G125459
TU168753 lncRNA upstream 754 19898684 ~ 19899174 (-) True G125460
TU168838 lncRNA upstream 93478 19991408 ~ 19993321 (-) True G125524
TU168856 lncRNA upstream 245653 20143583 ~ 20144749 (-) True G125539
TU168860 lncRNA upstream 249486 20147416 ~ 20149179 (-) True G125543
XM_039818461.1 mRNA downstream 101447 19790052 ~ 19796220 (-) True LOC120570223
XM_039818460.1 mRNA downstream 101448 19790052 ~ 19796219 (-) False LOC120570223
XM_039817058.1 mRNA downstream 123636 19771293 ~ 19774031 (-) True LOC120569249
XM_039817911.1 mRNA downstream 129081 19751701 ~ 19768586 (-) True si:ch211-214p13.3
XM_039817912.1 mRNA downstream 129082 19751701 ~ 19768585 (-) False si:ch211-214p13.3
XM_039817084.1 mRNA upstream 2312 19900242 ~ 19907077 (-) False nr1i2
XM_039817083.1 mRNA upstream 2312 19900242 ~ 19907077 (-) False nr1i2
XM_039817082.1 mRNA upstream 2312 19900242 ~ 19907076 (-) True nr1i2
XM_039819024.1 mRNA upstream 10564 19908494 ~ 19913720 (-) True cfap91
XM_039819008.1 mRNA upstream 23338 19921268 ~ 19923735 (-) True si:ch211-214p13.7
TU168717 other downstream 101629 19790531 ~ 19796038 (-) False LOC120570223
XR_005640980.1 other downstream 129081 19753043 ~ 19768586 (-) False si:ch211-214p13.3
TU168581 other downstream 300146 19595929 ~ 19597521 (-) True G125326
TU168242 other downstream 1192990 18703095 ~ 18704677 (-) False G125090
TU168785 other upstream 23424 19921354 ~ 19923694 (-) False si:ch211-214p13.7
TU168944 other upstream 561232 20459162 ~ 20461629 (-) True G125619
TU168946 other upstream 566179 20464109 ~ 20467185 (-) True G125620
XR_005641101.1 other upstream 965855 20863785 ~ 20863953 (-) True LOC120570677
TU169256 other upstream 1060393 20958323 ~ 20960064 (-) False G125842

Expression Profile