RNA id: XM_039817069.1


Basic Information

Item Value
RNA id XM_039817069.1
length 2352
RNA type mRNA
GC content 0.48
exon number 7
gene id klhl6
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 19349763 ~ 19355290 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AGAGCACAGGAAAAAACAAATCCACatttcaaagcaacacaactgtTGCAGACTAAACCACAGGGGTCTGTTTTACTAGTGCAGGTGCGACTAAAGTAGCTGCACGCTGTTCTTCCGTGTTTCTGAAGAGCTTAGTGAAAAAGATGAGTGAGTCACTGGAGAGGACTACAGACGGTCCCTTGCCGCTTCTTGCAGATGAGTCCAGTCCGGACGAGGGGAGAAACAGCCTGACAGGCTCCAGTGAGTTACGCTGGGAAGATGGAGGTCTACCTGTGGAGCTGCAGAGAGGGATGGAGACCCTACGAGTAAACAATGAACTGACTGATGTCGTACTGTGTGTTCAGGGACATGACTTCCTTTGCCATAGAGCCATACTCGCTGCTGCCAGTCATTACTTCAGGGCCATGTTTTGCAGTGGTCTGAAGGAGAGTCATGAGGAGCGTGTGGAAATAAAGGGGTTGGACAGCGGGACGATGCAGTCTCTCCTGGAGTATACCTACACCAGCCGTGCCCTCCTAACCCACTCAAATGTCCAGAGAATACTAGAGGCTGCCAGTCAATTTCAGTTCTTGCGTGTGGTGGATGCATGTGCTGGTTTCCTGAGCAAGTCACTGCAGCTAGAGAGTTGCATTGGGATCCTGAATCTTGCTGAAAGCCATGCCTTGCCGGCCTTGAAGACCGTGGCTCAGGATTACATTACCACTAAGTTCTCCCAGGTAGTCCAGCAGCCGGACTTCCTGGAGCTGCCAGTAGAGTCTCTGGAGGCCGTCCTGCAGAGGGACGACCTTGATGTGAAGTGtgaggagtgtgtttttgaagCACTCATGCGCTGGGTGAGAGCCCGGCAGGATGAACACTATCCTTCACTAGCCAGGTTGCTCTCACACGTGCGACTGCCATTGTTGGAGCCTGCGTACTTTGTAGAAAAAGTAGAATCAGATGAACTGATTCGCCACTGCAATGAGGCTTTTCCTTTGCTCCAAGAGGCCCGCATCTATCACCTCTCCGGCAGTGAGGTGGTCTCTGAACGAACCAAACCCCGTGTGCGGCACTTTCTATCAGAGGTGTTTCTAATCATTGGAGGCTGCACCAAAGATGAACGCTTCATTTCCACTGTCACCTGTTTGGACCCCCTCAGACGCAGCAGGctggaggttgccaggctgccAATCACAGAGATGGAGGATGAATCCCAAAACAGGAAATGGGTGGAGTTTGCATGCATCACCTTCCGCAATGAACTGTACATATCTGGAGGTAAAGAGACAAAGCATGATGTTTGGAAATATAATGGCGCCCTGGACAAGTGGATCCAGATCGAATCCCTGACAACTGGGCGCTGGAGACACAAGATGGCAGTTCATGGGGGGAAAGTGTACGTACTGGGTGGATTTGATGGAATTCAGAGACTCGATAGTGTTGAAGCCTATGATCCCTTTCACAATCGCTGGGCACAGGTGACACCTCTTGCAGTAGGCGTGAGCTCCTTTGCTGCTGCAAGCTTTGACAGATGGATCTATGTGATTGGTGGCGGGCCGAATGGAAAATTGGCAACTGATAAGGTTCAGTGCTGGGAACCTGGGACAGACAGCTGGGAGCTGCGGGCGCCCATTCCAATCGAAACCAAATGCACTAATGCTGTCACTTTCAAGAACTGCATCTATATAGTTGGTGGTGCCATGCATGCTATGTACTGCTACTCACCTCTGTCAGACTCCTGGTGCCTTGTGACCCGTCTGGGGGAGAGGGCGAGCTGCGCCATAGCTGCCTGTAACAACAAACTTTTCATCACTGGGGGACGAGATAACAAGAACCAAGTCATCTCCACGGTGATGTGCTGGGACGTTGGCAGAGGGGTGTTGACAGAAGAGTGTGTTTTACCTATGGGAGTGTCCCACCACGGCAGTGTGACACTCATGAAgtcctacacacacatacacagaataACATCTGCTTCAGAGTGCCAATGACACAGACTTCAGTGAACAGGACATTGTTGTTTAGAGAATGACTGAAAGAAAAAGTGAGGAAGTGATGAAAATGGAGATGATTTATGTGCGTGCATTTAATGTGCATTTTATGCAAATGTATGCCACTTTGAAATTGGAGTTGATCACTATGTTTACCACCTTTAACAGTATAATGTTACATGACATCATCAATTGTTGAAACTTTATTTAATACTGCTGAAAAATCTATGTACAACTGTAATAACAGATTAATTGGTATAAACCAAGAAATACATTGTTTTATGGCTTTTACAGTTAACATAAAGATTGCAAATATGCTAAGCAAAGCAACGTTGCTGTTAGAATATTTGgattaaataaatatgcatatttTAATAACAAA

Function

GO: NA

KEGG:

id description
K10444 KLHL6; kelch-like protein 6

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU168460 lncRNA downstream 116142 19231992 ~ 19233621 (-) False tbl1x
TU168446 lncRNA downstream 143822 19201746 ~ 19205941 (-) True G125227
XR_005640882.1 lncRNA downstream 235982 19108684 ~ 19113781 (-) False LOC120569517
TU168387 lncRNA downstream 237979 19108300 ~ 19111784 (-) True LOC120569517
TU168374 lncRNA downstream 258984 19089502 ~ 19090779 (-) True G125178
TU168536 lncRNA upstream 76774 19432064 ~ 19432431 (-) True G125293
TU168537 lncRNA upstream 80352 19435642 ~ 19436047 (-) True G125294
TU168538 lncRNA upstream 84136 19439426 ~ 19439851 (-) True G125295
TU168547 lncRNA upstream 99127 19454417 ~ 19459245 (-) True G125299
TU168559 lncRNA upstream 192425 19547715 ~ 19550418 (-) True G125311
XM_039819030.1 mRNA downstream 704 19338941 ~ 19349059 (-) False LOC120570610
XM_039819029.1 mRNA downstream 704 19338941 ~ 19349059 (-) True LOC120570610
XM_039819103.1 mRNA downstream 90917 19231987 ~ 19258846 (-) False tbl1x
XM_039819104.1 mRNA downstream 90917 19231987 ~ 19258846 (-) False tbl1x
XM_039819106.1 mRNA downstream 99529 19231987 ~ 19250234 (-) False tbl1x
XM_039817709.1 mRNA upstream 110434 19465724 ~ 19468732 (-) True rpe
XM_039818602.1 mRNA upstream 136221 19491511 ~ 19498560 (-) True ackr3a
XM_039817121.1 mRNA upstream 196036 19551326 ~ 19556641 (-) True casq2
XM_039818776.1 mRNA upstream 202220 19557510 ~ 19559519 (-) True LOC120570428
XM_039818774.1 mRNA upstream 215581 19570871 ~ 19575591 (-) True LOC120570427
TU168242 other downstream 645086 18703095 ~ 18704677 (-) False G125090
TU168244 other downstream 645086 18703129 ~ 18704677 (-) False G125090
TU168243 other downstream 645211 18701648 ~ 18704552 (-) True G125090
TU168240 other downstream 649961 18695480 ~ 18699802 (-) True G125089
TU168581 other upstream 240639 19595929 ~ 19597521 (-) True G125326
XR_005640980.1 other upstream 397753 19753043 ~ 19768586 (-) False si:ch211-214p13.3
TU168717 other upstream 435241 19790531 ~ 19796038 (-) False LOC120570223
TU168785 other upstream 566064 19921354 ~ 19923694 (-) False si:ch211-214p13.7
TU168944 other upstream 1103872 20459162 ~ 20461629 (-) True G125619

Expression Profile