RNA id: XM_039817522.1


Basic Information

Item Value
RNA id XM_039817522.1
length 5427
RNA type mRNA
GC content 0.49
exon number 17
gene id map3k19
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 8775731 ~ 8793309 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gggaagagaagaagaaaggagaggaaacaCTAGAGTGGAGAGTCTGTTGAAAAGGATCAAAAGGTTTTCTCGTCAAATGTCCACAGAGGGTCCGAGAAGACATATGGCTAGATGAGCTCATGAAGGAATGTGACGAACGGGAGCTGAAAGAACAAAATGACATCACTACAgtcAAGTGGTGTCTGGCCTCCTGCTTAGACTCGGCTCTTCTGTCCGACTGCATTCACGCAGATCCGACTGAGATCCTGTGAACTATGGAGAGAAgcgagaagagaagagagataaGGAGTGTTAATGAGAtgctgaaaagagagaaagaggaggaaaatgAAGAAGTCCTGGTTGTGAGCCGTGGACAAGAGGTAGAGGGCCGGGAGGATTTGGAGGTCTCCGACTCTgacgatgaggaggaggaaggatcCACTCCCCTTATCGCTGCCTGTCACAAAGGCATGCCTgagGTGGTACAGCAGCTGCTGGGGGCCGGGGCTGATGTCACCTTGTGTAACTGCAGCCAGCAGACAGCGCTCCACGTTAGCCCTCCTGAGCTCCAGGGGAAAGTGTTGGGATGGATGTCGAGGCCTCATCTGCCTCCCCAGGCacagctgctgcaggctgccTGGCAGGGAGACCTGCACTCTTTACAGCACCTGCTGGTTCAGACAGACAAGGTGGATGTGAATGTTCCTAATTGTGACGGCGTGACGGCTGTGATGCTTGCTGTTCGGGACATTGACCTGTTTGAGGCCTTAGCGATaccgttgccatgggaacacCGACCTGTGGAAGTGGTAAAGGAACTGCTGGAACTCTCAGCTGATCTGCGGGTACGAGACCACAATGGCCGTTCTGCTTCCCACTACGCTGCTAACATCAACAGCCCTCTGAAGGAGGACATCATTCACATGATGGTTGAGGCCCTAAgtcacacagATGCTGCCTCCATGTCACTCCTAGCCCTTGACAAATACCCATGCCAGGATTTGGACTCAGAGTTTGGAGATTCGGACATAGAGTTGGACCTCGAGAGCCTTTGTCCTTGTCAGTCGACTGCTGCCTCCCCCACGCAGACACCAACCCATCAGCACGGCTTTCTCCTTTACAGCCACACAGGGGAAGTGCTGGAGTCTCCAGGGTCCCCTCCTCTATCTGACCATCACAAAGGCCTCCGCCAAGaTAAGGGAATCCCCCTCTGTTTCCAAAACGCCATGGAAACACTGAGAGACATCAGGCAAGCCTACCAGGACGCAGGGAGGGGAAGCAGCAGAGGAGGTTTGTCTCTGCCGAGCCTGGGCGACAACAGCAGACGCTGGAGCCATCTGGATCCTGCTCCCTCACCTGGTTTGCTGAGTACCAGAACCTCCTGCCTGCCAGTACCACCTAAACAGAGGCAGAGAACAAGAAGTGTGGTTGCTGTATCCCCATCCTCCCCCGGCCTGCTGTCTGTGGCTGAGCACAGTCAGCTCAGCCAATCAGCCCCCAGCATCATGGAACCACTACTGTGTTCAACCACTATGATGCAGGCCAGAGCACACATTCAAACCCGACTGGGTTCTCAAGACACTGTAAATCAACAAAAGTTCTCGCAGGGTCCCTTGCCGGCTCTGCATCCCAGAACACCGAAGCTGTTGGCACCACTGGACAGAAGGCCCAGGGACATTGCAGCTCTGCCAGAACTAAAGCCCCACATTCCCCTGAAGCCCATCAGCCGGAGCCCGCTTTGCTCCAGGAGTCGGCTTAGGAGAGAGAGGCTGTACTGGGGCAGCCCACGCACTGGCCCTGTGACCACTAAGGGGGGTAGTGAGGAGAGCGGttccagcagcagcattagcagcCAGAGTTCCGTCGACCTGGATGATGAGGAAGATGAGAGGGATATGCGTGAGAGAGCTTCAGGAGAAAGACATCTGAAGTTCGTAGGAGACAGGTTGTTGCCGCATTCAAACGATGTGAGCTCCACCGAGGCTGATTTGGTTGAGGAGACCCGGCAGCATTTTAAAGTTCAGTCAAGGATCAGTCATATTCCAGCGATCCACAGATCAGCACATGACCTGGATGGAGAGCCTATCAATCATACAAATGATCTTCTCAGCACTAATAAAGCTATGAACTCTCACTGTGAAGGCAAAGCCACCAATGTGAACTATACAAAGGAGCCTGTTGACAATCAGTCCTTTATAAAACGTAACTATGCACAACAAGGAGACACTGTGAACAATGAAATACCTATCACATCAAAGTCTAAGGAAGAAAAGAACGATGTGGGCTGCTCCCCGGAGCCTGAGATTAGCCATGGGATAACATTTAATATGAGTAATGACCAAGGTCATGTTGTTGCATGCTCTGAAGAGACTTACAGAAATGACCTGCAGGATatcaaacagacagaaagaacaATGAATGTTTCCTGTTTGGAAGAAATCAGAGTAGATAACCCAATCCCTCGTAGGGAGGATGGAAAGTTAACTACTAGCACTACTGAGGAGAAAATGCAGTTATTTACTCCAGCTGTAAACCTTCCACAATCAAGCATGGATCCCAAGAGAGCTGAGAGGATGTTGAAAGGTTTAAAGCCTGTCCGAAACAAAGAGAGAAGAACCAACATGAACTGTGAACCAAGAGCAAACATTCAAACCAGCCAGCAGTCCTTCAACGTTTTAGCACACAAAGACCGAAGCATCTTAAATCGGAACAAGTCCAAAAACAATCTGAAGTACTCCTCACTTTCCACACAAGTTAAAgataaaaccaggaaaagcCCCGAGCTAATAATTGGTGGAGAGACAGTGACAAAAGTAAAGTCGAAGCTTAAATCTGTTAAAGGTGCTCATTGTTACACTGGCACCCCGTCAACACGAAAGAAGCTCATTGATCAGGGCAAAAGAGGAAATCCTGACAAGATGACGAACAGCAACAGAGCTCCACCGTTGAGGGAGCTGAAGAGCGTCCGTCAGTTGAAGAGACCAGGTCTAGCTGGGACACCGAGGTCTAAATCTGCCGTGGACTTCATCACATACAAAGACATGTTTCAGGAGATACAGAGTGGGGATGAAGGACCGGCCATCTACGAGATGTTTGCTGGTCCGATCTATGATAACCTACGAGTTTCCAGCACCAGTGGGAAAGTAAAGGACAGACAAGTGCAGTCTGCTCCGCCGAGGAAGACACAACAGTGCCATAAAGTCAAACACAGACCATTGAAACAAGCACCGAGGAGAAGTCTGGGGGAGAGTGTAGTGGTTTCAGCTAAAAGCAAACATAAACTTGCGTCCTCCAGGGTTAAAACTCACAAACCTGTACCAAGGAAAGGCACACACAAAATCAAGGATATGCCTAAATCAGATGGGCACGCAGAGGCTGAGTTAGCTCTCTCTAAGGATGTTGACATTTGTCATACAACgtctcaagatactatcttatCTACCATAGAGGAGGCTCTTTCTAGATATGGGTCTGAAACAATCAAATCTCATGACAAAACACTGACTATGCCAGCAGGTTCATCTCATGCTGAAGATTATAGTTACCTGCACATGAATATGCAAGAAATCGGAAATCCAAACCGACCGTTTCCTGAGCCTGTGTTATCTCAAAGCCCCGAACAGCTAAAGGTTAATACATGGGCGTCTTCCAGCAGCAACCACACCACTGCCATGTCACCAGTTTACCGGAAGTTTCTGGATGAGGTGGGGGACGGGCCGCTTACAGATGACCTGCTGCAATGTCTGGCCGAGGAGCTGATCTCACTGGATGAGAGGGATGTATCCATAGGCTCCGAAAACATGGAGTCCAACAGAGAAGACGAGCGAGTGTCAGGAAGAAATAAAATCCCTGAGGTTAATTCAAAAGACGGTGCTACTCTTCTTGGCTCTGGGTTGGTTGTGGACGACGCCATCACGTGGACAAAGGGTGAAGTGCTCGGCAGGGGAGCCTATGGGACAGTGTACTGTGGCCTGACCAGCCAGGGCCAGCTGATAGCTGTGAAGCAGGTGAGACTGGATGCCTCTGACCCCGACGATGCAAAGAGGGAGTACAGTCGTCTGCAGGGGGAAGTGGAGCTGCTCAAAACCCTCAGACACACCAACATTGTGGGCTTCCTGGGTACCTCACTTTATCAGCATGTGGTTTCCATTTTCATGGAATACGTCCCAGGAGGATCCATCGCCAGCATCCTTCACAGGTTTGGCCCTCTGCCAGAGCGTGTCCTGGCTCTTTACACCCATCAGATCCTGAAAGGGGTGGCCTTCCTTCACCTGAACAGAGTGATTCATCGGGACTTGAAGGGAAACAACGTCATGCTGATGCCCACTGGCGTCATCAAGCTCATAGACTTTGGCTGTGCGCGCCGTCTCAGCTGCCTGAACCACACTGCCAGCAACAGCGGCGATCTGCTCAAGTCTGTCCACGGCACACCTTACTGGATGGCACCAGAGGTTATCAATGAGACAGGATATGGCAGGAAGTCAGATATATGGAGTGTGGGTTGCACTGTGTTTGAGATGGCCACAGGGAAACCACCACTGGCACACATGGACAAGATGGCTGCCTTGTTCTACATTGGGGCTCAAAGAGGGTTGATGCCCTCCTTACCAGATGGGTTTTCGGAAAACGCCAAGAATTTTGTGGCAATCAGCTTGACAAGTGACCAGAGACTACGGCCGTCTGCAGACCAGCTGCTGAAGCATGTATTCATTCCTCAAAGTGAGACTGAAGAGAACTCTTGGGAAACACAGAAAAAGAACTGCTGTGGTCACCCAGAGGGACTCTGTGGCTAAGTTACACAAAGACAGAATGCTTTTGAGTTCAAGGGGACATTTAATGCGCCAGATTGTTGATTCAAAACATCAAGTATTCTTCGGTGACCCTTTAATGGGCCAGCCACCTATCCCCAGTGATGCACTAGTAGTGTTTTTGGGAGCAAAAGGGCGCTGGGCTCATGTCCCAGGCCTTTCTGGAAACTACAACAAACAAAGTATATCAAGAAGGACCTGTAGTCATTGTACTCTTAAGTGGAAGTTTAAGAAGCTACATGAGAAGCACTTTTATACGTTTAACTTTAATAGAACCTATAAAATGTGAACAGATAGATGCCAGATTTTTGCTACCGACTTCGGATGTTTCCTATAGCAGTCTTTCAAATGTGCCAATCTTATAAATACCTTAATTTTATATCTATACAGTCCAATTCTAGTTCTCTCTGCTGTGTAATATATGTATGTTCTGATAAAATGTGTCTAATCCATATACAGCATAACTTTCATAACCTAAAGTTTTCCATGCTGAGAATGTATACTACTTCCTGTTAGCTTTCCTCCGAGTTATTGAGGAATCAGTGCGTACAATTATGCTCAAGAGACATGCCACAAATAAAAACTTGGCATTACTTTAAGCAAATAAACAAGCATGTCTGCTCCATTCTACAAATCA

Function

GO: NA

KEGG:

id description
K17533 MAP3K19, YSK4; mitogen-activated protein kinase kinase kinase 19

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU165122 lncRNA upstream 310040 8461507 ~ 8465691 (+) True G122787
TU165113 lncRNA upstream 361435 8408779 ~ 8414296 (+) True G122779
TU165084 lncRNA upstream 459038 8315193 ~ 8316693 (+) False hdac4
TU165050 lncRNA upstream 717775 8057042 ~ 8057956 (+) True G122723
XR_005640865.1 lncRNA upstream 927017 7843015 ~ 7848714 (+) True LOC120569330
TU165209 lncRNA downstream 138 8793447 ~ 8871109 (+) True G122847
XR_005641031.1 lncRNA downstream 198373 8991682 ~ 8992991 (+) True LOC120570217
TU165252 lncRNA downstream 203937 8997246 ~ 8998182 (+) True G122875
TU165257 lncRNA downstream 207744 9001053 ~ 9001424 (+) True G122880
TU165273 lncRNA downstream 264244 9057553 ~ 9057935 (+) True G122895
XM_039817427.1 mRNA upstream 95268 8632256 ~ 8680463 (+) True ube2f
XM_039817424.1 mRNA upstream 150840 8608126 ~ 8624891 (+) True LOC120569556
XM_039817423.1 mRNA upstream 150840 8616661 ~ 8624891 (+) False LOC120569556
XM_039817426.1 mRNA upstream 160452 8610378 ~ 8615279 (+) True LOC120569558
XM_039817425.1 mRNA upstream 168784 8602934 ~ 8606947 (+) True LOC120569557
XM_039817533.1 mRNA downstream 12508 8805817 ~ 8881566 (+) False tmem163a
XM_039817532.1 mRNA downstream 24020 8817329 ~ 8885626 (+) True tmem163a
XM_039817534.1 mRNA downstream 30338 8823647 ~ 8881566 (+) False tmem163a
XM_039818278.1 mRNA downstream 108339 8901648 ~ 8957701 (+) True LOC120570049
XM_039818163.1 mRNA downstream 392627 9185936 ~ 9196127 (+) False LOC120569945
TU164880 other upstream 1626692 7146625 ~ 7149039 (+) True G122588
TU164440 other upstream 3563883 5209133 ~ 5211848 (+) False ybey
TU164412 other upstream 3609833 5164233 ~ 5165898 (+) True G122226
TU164393 other upstream 3705600 5060001 ~ 5070131 (+) True LOC120569936
TU165208 other downstream 2144 8795453 ~ 8796746 (+) True G122846
TU165423 other downstream 1127402 9920711 ~ 9924840 (+) False umps
TU165424 other downstream 1133508 9926817 ~ 9928891 (+) False umps
TU165581 other downstream 1814175 10607484 ~ 10618696 (+) False lrp1bb
TU166170 other downstream 4256449 13049758 ~ 13279866 (+) True G123539

Expression Profile