RNA id: XM_039817732.1


Basic Information

Item Value
RNA id XM_039817732.1
length 8184
RNA type mRNA
GC content 0.49
exon number 41
gene id myo10l3
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 15443454 ~ 15500197 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TTGAAACGACTAGACAGCACAGCAACACAGCACAGCCCCACACAGGCTTCACGGGACACCCAACAAACAGTGAAGAAAACTCTTAAGTGTAGGAAAATAGGACTGCAAATGACTCGAGTCTTTTGAGCGGTGGGGGGGTACGGAAAGAAGAACTTTTCTTTATACTAACGACGCGGATGGAAATCATTTGGGAATAcagcttcctctcctcctcaaccGTGGTACCCTGAACTCAGACTACAAAGGGACGTGAGGTTTGGGCACCGTGAAAATGGATACATTCTTTTTAGAGGGGGCTCGTGTCTGGCTGAGACACAAAGAACAGCTCCTCCCCTCCACCGTCAGCTCTTGTGATGATTCGTCCTTGGTCCTCACCACCGATTATGGGAAGgtGATCTACCTCCAGAAGGCGGAGCTGAACAGGGAGACGGTGTACCCGATGCTCCCCAGTGGCATCCATGGAGTAGAGGACATGTCCACGCTGGCAGAGCTGCATGAAGCTGCCATCATGCACAACCTGTTTCTGCGCTACCAGAAAGACAACATCTATACCAACATAGGTTCCATCCTGGCAGCAGTAAATCCCTATAAGCATATAGCGGGCCTGTATGGCGGCACTGCAGTCGATCTGTACAGCAAACACCAGATGGGGGAGCTGCCTCCTCATATCTTTGCCGTGGCCAATGAGTGTTACCGCTGCCTGTGGAAGAGACACGACAGCCAGTGTGTTCTCATCAGTGGGGAGAGTGGTGCCGGGAAGACCGAGAGCACCAAGCTGCTGCTGAAGTTTCTCTCCGTGATGAGTCAGAACTCAGCAGGCACTCCTCTGTCAGAGAGGACCACCAGGGTGGAGCAGGCTCTCGTCCAGAGCAGTCCCATCATGGAAGCCTTCGGGAATGCTAAGACTGTGTACAACAATAACTCCAGTCGCTTTGGGAAGTTTATCCAGCTACACTTTTCCCAGAACGGAAACATTCAGGGAGGCTGCATCATCGACTATTTGCTGGAAAAGAACCGTGTGGTTCGACAGAATCCTGGAGAGAGAAACTACCACATCTTCTACGCTCTGTTAGCAGGGGCGGACAAAGACCACAGAGACATGTATCTCCTGTCCGAGTGTCCTGAGTTGTATCACTACCTCAGTCAGTCAGGCTGCGTGCAGGACATCAGTTTGGATGACAAGCAGCTCTTTGACAGTGTGATGGAGGCCCTGAAAGTGATGGAGTTCACtgaggaggagatcagagacGTGTTCAAGTTGCTGTCTGCTGTCCTCCAGATGGGCAACATTGAATTCATGACCGCTGGTGGAGCTCAGATCACTTCCAAAGGCGttgtCAGTAATGTCAGCGAGCTGCTCGGCCTGGACTCCTTCCAGCTGTCAGAGGTGTTGACCCAACGCTCCATGATcctcagaggagaggagatctGCTCACCACTCACTGTGGAGCAGGCTGTGGACTCGCGTGACTCAGTTGCCATGGCACTTTATTCTCAGTGTTTCTCCTGGATCATAATGAGGATCAACCAGAAGATCAAAGGCAAAGACAACTTCAAGTCCATCGGCATCCTGGACATCTTCGGCTTTGAGAACTTTGAGGTGAACAGGTTTGAACAGTTTAACATCAACTACGCCAACGAGAAACTCCAGGAGTATTTCAACAAGCACATCTTCTCGCTGGAACAGCTGGAGTACAACAGGGAGGGGATCCAGTGGGAGGCCATAGACTGGATGGATAACGCAGAGTGTCTGGATCTCATAGAAAAGAAACTGGGCATGTTAGCTCTTATCAATGAGGAGAGTCGATTCCCCAAAGGCACGGACTACACCCTCCTGGAGAAACTACACAGCCGACACGCAACAAACCCATACTATGTGAAGCCCAGAGTGGCCGACCACCAGTTTGGCATCAAGCACTACGCTGGAGAGGTGCTGTATGATGTGCGGGGGATCCTGGAGAAGAACAGAGACACCTTCAGAGACGACATCTTGTTTATTCTTAAAGACAGCAGGCTTGACTTCATCTATGACCTCTTTGAGCATGTTGGTAGCAGAAATGGAGATGAGACCCTAAAGATGGGCACGGCCCGACGCAAGCCCACTGTCAGCTCTCAGTTCAGGGACTCTCTCCATTCCCTGATGGCCACACTAAGTGCCTCCAACCCTTTTTTTGTACGCTGCATCAAACCAAACATGGACAAGAAGGCCAACCAGTTTGATCCTGACGTGGTCCTGAACCAGCTGAGATACTCTGGGATGCTGGAAACTGTGAAGATCCGCAGGGCCGGATTTCCCGTCCGTAGAACCTTTAAGGACTTCTACAGCAGATACAAGATGATCCTGAAGAACAAAATCCACTCAGACGATGAGAAGCAGAGCTGCTCGGAGCTTCTCACACTTCATGACAAAGCCAAAACAGAGTGGCAACTGGGGAAGACAAAGGTGTTCTTGAAGGAGGCCCTGGAGCAAAGGCTGGAGAAGCAGAGGGAAGAGGTGCGGCGCGGGGCTGGCATGGTTATCCGCGCCCACATCCTCAGCTATGTGGCAAGGAAACAGTATAAGAGGGTTCAGTCCAGCGTCGTCACCATCCAGAAGAACTACCGCGCTCACTTTTGGAGACGCGTCTTCCTGCGCCTGCGCTTTGCCACCATCATCCTGCAGAAACATCACAGAGGCCAGCTGGCCCGATCCCTCCTCCGCCAGCTCAAAGAGGACAAACAGAagcgagaggaggaggaggagaggaagaggagagaagagaaagaggagaggaggagagtagaggaggagaggaggagactggaggaggagaggagacagcaggaggaggaggaaaagagaaagagggaggaagaggagagacagaggctCATGGACgaggagatgaagaggagggaggagctgaggctgatgaaggagaaagaggaagggcaGAAAATGGCAGCTAAAGCAGATGAGAAAAGGAACTTGCTGGTAAATGGTGTTTGTCAGAAGAAGGAACTGTCCCAGACTTTGTCCCACAGTCACACCTCTGAGGAGGAGAGCCGTCAGATGGAGGAGATCCTGCGGCTGGAGAGGGAGATCGAGCGCCTGCAGAAGCAGCAGGAAGATGGCGTGTCCCTTCTCGGAGACGTCTCCCACGAGGAGCTGCGGCAGATGAGAGACGCTGAGATCTACAGACTGGAGAAGGAAGCTTCCCGCGTGGCTACTGAGTTTCTGGAGCTCTTGGACTTTGGTGGTTTAGAGCCATCGCTCTCGAGTGAGGAGAACCTCCACGACCCGACTGACTCTATAGCCCCTCTGGCTGAGGAGGAGGTAGACGAGGGTTTCCACGCTGAGGATGAGTGCGTTCCTTTGCCTGACTTCCCTCCTACGGCTGCGGTTCCTCTGGACAAAGAAGTATTCCAAAGTATTCCCCCTCCTCCGCCTGCCTTTGCAGAAGGACTAGTTGCAACCCCTTCCTCTGCCTCCTGTCCTGCACCGGCAAAGCTCTCCCCACGTACCCCCAACGGGCTGAGTCATGCCCCTGCTCTCACAGACTCCCCAACCTCCAGACCTCCTTCTCTAGTCACTAATGGAGAAAGGCAGCCGTGCCAGAGAGCCAGCAGGGGGTCCGACTTTGAGCCTGTGAGAGAGGAGCCTCCAAACTCAAACCAGCCAGACACAGAGTCGGACTACGACCAGGAGGAGTTTGAGGAGGCTCATGGGAGCTCAGGTGCTAGCATCAACGACGGCCATATCACAGACGAGGAGGTGTTGCGAAAATCCTCCTGCACCCAAAACAGCCTGGACTCCTTCAGAGGCAGCTCAGACTCGttcATTGACAGCGATGAGGACAACGATGGCTATGTGGACACAGATGAGGAAGTTTCCAATGGGAGAGTTAATCTGCTGAATGGCAGTGGGCCTCCATACTTCCACGGCTACCTCTACATGAAGAGTGGTCTGATGATCCCGTGGCGTCGTCGCTGGTGTGTCCTAAAGGATGAGACCTTCATGTGGTTTCGGGCCAAACAGGACTCACTCAAATCCGGTTGGCTTTACAAGAAAGGAGGAGGGATGTCCACCTTATCTCGGCGCAACTGGAAGATGCGCTGGTTTGTTCTGCGGGAGTCAAAGCTCATGTACTTTGAAAGCGACAGTGAAGAGAAGCTGAAAGGAACCATCGATATCCGCACAGCCAAGGAGATAGTGGACAATCATGAGAAGGAAAATGCACTGAATATTGTGACTGAGGAGAGGACCTACCACATCTACGCAGAGTCCCCAGAAGATGCCAGTGGTTGGTTCAATGTGCTGAGTCGGGTCCACAGCGTCAGCCCGGAGCAGCTCATGGAGATGCACCATGAACAGGCCAACCCAAAGAATGCAGTGGGCACACTAGATGTGGGCTTGATTGATTCTGTTTGTGCGTCAGACAACCCCGATAGACCGAACTCGTTTGTGATCATCACGGCTAACCGGGTGATccactgcaacacagacacagctGAGGAGATGCACCACTGGATCGGCCTGCTGCAGAAGTCCAAGGGAGACTGCAAGGTTGACGGACAGGAGTTCTTAGTCAGAGGCTGGCTACATAAAGAGATGAAGTCTGGAGCCAAAAGCACTTCTCTGAAGCTGAAAAAGCGCTGGTTTGTTCTCACCACTACCTCTCTGGATTATTATAAGTCGTCGGAGCGCAGCACTTCCAAACTGGGAACTCTGGTCCTCAACAGCCTCTGCTCTGTGGTGCAGCCAGATGAGAAGGTCTTCAAGGACACTGGTTACTGGAATATAATCATCCATGGACGTAAACACTCTTACCGTCTTTACACCAAAATGTTGAATGAAGCCATGCGGTGGGCGAATGCCATACAGGGAGCAATAGACAGCAAAGTTCCCATTGAAACGCCAACACAGCAACTCATCAGGGACATCAAGGAGAGCAGTTTGAACGTGGAGGCTGTGGAGCAGACATACTGGAGGAACCCCATCCTGAGATATACCCAGCATCCTTTGCACTCCCCTCTTCTACCTCTGCCCTATGGAGATGTCAGCGTCCACTTGCAAAAGGAAAAGGGTTATACCAGCCTGCAGGATGAGGCGGTGAAGATTTTCAACTCACTGCAGGAGATGGAGGCCGTGTCAGACCCTGTCCCAATCATCCAGGGAATCCTTCAGACCTGTCAAGACTTGAGGCCGTTAAGAGATGAGGTTTACTGTCAGCTGATCAAACAAACCAATCATGTCCCGCACCCAAACAGTCCTGCCAATCGCGCCCACTGGCATCTCCTGACCTGTATGTGCTGCACCTTCCTGCCCAGCCGAGGCATCCTACGCTACCTCAAGTTTCACCTCAAAAGGATTAAGGAGCTGTTCCCTGGTACAGAAATTGAAATGTTTGCCCATTTCATCGGTGAGTCTCTGAAGAAGACCAAGAACAGAGAGTTTGTTCCCTCTCAAGAGGAAATCGTGGCACTGCTTACCAGACAGGAAATGACCACCACAGTGTACTGCCATGGAGGAGGCTCCTGCAAAATCTCCATTAACTCACACACCACCGCTGGAGAGGTGGTGGAGAAGCTAATCCGAGGTCTGGCTATGGAGGACAGCAGGAACATGTTTGCACTATTTGAACACAACAACACTATTGACAGAGCTGTGGAAAGCAGGGTTCTTGTGGCTGATGTGTTGGCTAAATTTGAAAGACTTGCTGGCAGTGAGGAAGCTGAGGATGAAGGCCAATGGAAACTCTATTTTAAACTCTACTGCTTCCTGGATGTGGAGAGCATGCCTAAAGAAGGAGTGGAGTTTGCGTTCATGTTTGAGCAGGCCCATGAGAGTTTGACCCGGGGCCACTTTCCTGCCCGAGAGGAGACCCTGCAGCACCTGGCTGCTCTACGCCTGCAGTTTCTGTTTGGAGACAAAGCAAGAGTCACCTGGAGCCTGGAAAACGTCTATCCCGTGGGCCGCCTACGCAATCGCATCCTCCAGTTCACCAAGGTGGGTGGCGCCTCGGGGTCAGGCCAAACTCTGGAGCGTCGGAGGACTAGCTTCCTGGACGGGACCCTGCGGCGGGGGTTGAAGACGGGCTCAATGAAGAAGCAGCGCATGGAGGAGGAGCAGATGTTGGAGATGTGGATAAAGGAGGAGACGTCTGCCACCAGGGCGAGCATCGGGGAGAAGTGGTCCCGCCTCACTGGTCTGGACCAGCACCAGGCTATGCTCAAATACATGACCATCATCAAGGAGTGGCCTGGATATGGATCCACGCTGTTTGACGTCGAGTGCAAAGAAGGAGGTTTCCCTCATGATCTCTGGTTGAGTGtgagcgctgaaaatgtgtctgTCTACAAGAGAGGAGAGCCCAAGCCTCTGGAGACCTTCCAATATGAGCACATTATTTTCTTTGGTGCTCCACAGCCCTGCACCTACAAGATCACTGTGGATGAGAgagaaatgctgtttgaaacACCACAAGTTGGAGAGATCACAAAGATCATGAAAGCCTACATAAACATGATTGTGAAGAAGCGCTGCAGTGTGAAGTCTGTGTCCAGTTATGGAACCAACTGGATCAGGTGATTGACATACAGGACTCAAAATGTACTGTAAGCATGGGGAGAAGATGAAGAGATGGCAAAAGGAGCAAAATCACCTTGACAGAGATTGTGTTTCAGAGCTTATGACTGGCTACGTAGCAAAACAGACAAATTCCATCCAGAAAGATTCATTTCtatacagacacaaaaaaatggcaaaagtgGAAACATTCAAGCATCTGCACCATTTTAAGCTTTACAGTTGTGCTGACTGTTGCTCCCCTCCATGCAGTCTCCAAACATGATACTCACTCTTATAAGTTACACTGGTCATTTCTCACATCTTGCTTGAAATGTATGTGACTTtgtggattttgtttttttaaatatccaaGATAACCAAACCCCTATGTCTCACATTTCATTATAGACATGCATTCAACATCTGAATTAGGACCCTGAGTGTAAATTTTCTAAAAACATCCAAACTAGATAAAAGAATGTGTTGCAGTGGTAAACTGACTGAGATGTCACCTTTTATTCAAGTGTTTTTTCTACAGATATTTcgccccattgtaatgaatgttCTCCTGAATGGAGATTCCCTCAGGTGAATGTGTAATATAACTGTCCCAGGGAGATTATCTCCCTCATCTTGCCttatttaagttttttattttagctgTTCTGGACTAAAAGATTCAGTGCTGATGCAGCCTTTCAGGAATGGGATGTATATCTTGGGGTGTCGAGTATCTTTGTAGTTATGGCTTCCACTGGTAATGTGCTACAAAAGCACATCcctatctttaaaaaaacagaaaattcaaCATGAATAACCACTGCATCAGTGGAGATGCAACGTCTATAACCACTGCAGTTAAggattttctcaaaaggcaggATTATTAAGTCAGTCAAACTGTTTGTGCTTCTCTCCTAGAACAAGTGTATTTTGTGTATTGACTTGAGGGTATGTAGCTGAAACTGATCGCTTGTTCAGTATGGCTGTGTCTAAAGATTGTGTAACTGTTTTTTCAGTGATGTCAAAAGCCATGTAAGCGTGGGGTATTTATTTATGGAAGTATCAATTGATTGTGAGAATAGGCAGACTGAGCGAGGTGAACAGCGTGCTGGAAATGTATTGATGCAGTTGCCCTAgtacttttgtttttctgtttttgtgtgcattcaGGGACATAACATAACTTGCAATTATTTTTTGCCGTTTTGTGCCCTGTTTCTGAGCTTTTGTCAACATAAAATAACCTAAGTGTGTTGCCCTCGAGTCGACACCCAACGTGCTCAAttccttttattaatgttacatattttctctctttcaatGTAAATGAACACGAAGGATGCCTACAGTATGCCAGTTGACTTACAGTATAGTTCATGAAAAATGTATGATCCAAACATAATGAGCTTAGTATTTACCTCACATTGCATCACTGTCTTCCATCGCTCTCCAATCGTATACTCACTTAGGCGATCTGGTCAGCTGCCGGCGGCCACACCAGAGACTGAACTTGCCATTGACGATGACTGTATTTCTGagatttctgattttttttgaagaagaaaattcagaaaatgttttatattaGAATTTAAAGATGCTTTAATAAATTATTGTATTTGAAAAAgcta

Function

GO: NA

KEGG:

id description
K10357 MYO5; myosin V

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005640857.1 lncRNA upstream 27250 15415408 ~ 15416204 (+) True LOC120569294
TU166819 lncRNA upstream 193625 15243201 ~ 15249829 (+) False LOC120569306
TU166818 lncRNA upstream 193942 15243201 ~ 15249512 (+) True LOC120569306
XR_005640858.1 lncRNA upstream 195124 15243198 ~ 15248330 (+) False LOC120569306
TU166752 lncRNA upstream 211771 15226085 ~ 15231683 (+) True G123989
TU166967 lncRNA downstream 6816 15507013 ~ 15573848 (+) True sumo3b
TU166973 lncRNA downstream 36338 15536535 ~ 15567461 (+) True G124150
TU167012 lncRNA downstream 159210 15659407 ~ 15660859 (+) False galnt13
XR_005641030.1 lncRNA downstream 215409 15715606 ~ 15739958 (+) True LOC120570206
XR_005640866.1 lncRNA downstream 387940 15888137 ~ 15891006 (+) True LOC120569337
XM_039817729.1 mRNA upstream 16776 15420802 ~ 15426678 (+) True ankzf1
XM_039817730.1 mRNA upstream 16776 15420802 ~ 15426678 (+) False ankzf1
XM_039817756.1 mRNA upstream 94646 15345051 ~ 15348808 (+) True tmem41aa
XM_039818520.1 mRNA upstream 167271 15264124 ~ 15276183 (+) True smarcal1
XM_039818293.1 mRNA upstream 220214 15216368 ~ 15223240 (+) True xrcc5
XM_039817087.1 mRNA downstream 1920 15502117 ~ 15505588 (+) True pttg1ipb
XM_039818913.1 mRNA downstream 6787 15506984 ~ 15510196 (+) False sumo3b
XM_039817496.1 mRNA downstream 15264 15515461 ~ 15565574 (+) False fmnl2a
XM_039817509.1 mRNA downstream 15265 15515462 ~ 15565724 (+) False fmnl2a
XM_039817503.1 mRNA downstream 15265 15515462 ~ 15565710 (+) False fmnl2a
XR_005640926.1 other upstream 287568 15138477 ~ 15155886 (+) False trpm2
TU166397 other upstream 1209384 14233332 ~ 14234070 (+) True G123742
TU166312 other upstream 1766108 13635586 ~ 13677346 (+) False cps1
TU166270 other upstream 2089369 13353306 ~ 13354085 (+) True G123633
TU166170 other upstream 2163588 13049758 ~ 13279866 (+) True G123539
TU167128 other downstream 599074 16099271 ~ 16101611 (+) False dap1b
TU167490 other downstream 1497584 16997781 ~ 16999532 (+) False col28a2a
XR_005641003.1 other downstream 1627684 17127881 ~ 17177640 (+) False myo3b
XR_005640989.1 other downstream 2359963 17860160 ~ 17880726 (+) False hoxd10a
XR_005640990.1 other downstream 2360556 17860753 ~ 17880726 (+) False hoxd10a

Expression Profile