RNA id: XM_039817783.1


Basic Information

Item Value
RNA id XM_039817783.1
length 1811
RNA type mRNA
GC content 0.41
exon number 5
gene id mettl21cb
representative True

Chromosome Information

Item Value
chromosome id NC_053123.1
NCBI id CM020920.1
chromosome length 39440604
location 21012611 ~ 21017468 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGAGAGGTGTGTCACTGATGATGCTGCTTCtataaacacaaagacacagcagaGAAAAGTTCAGACACAACGGGAAAAGAGGAATTAGAGACGACTGCTTCATACAGTATTCAGTGGCCATGGAGAGATTGTCCACAGTCAGCCAACATGTCCAACAGAAGCATcatggaaagaaaaaggaggTGGATGACAAACAGGATAAGAAACTACCAGTGGAGCAGGGGACCACAGATGAGGCATTAAGAGATCAGAAAGTGATGGCAGGAGAGGCTTTGGAGAGGAGGAACATCTGGGAACCGAGTGTTTACTACGCGCTGGGAAAGGAGTGTTTTTACATCGCTGGTCATGACATCAGCATCCGCGAGTCTATGGATACTTATGGTGCTCTGATCTGGCCCGGGGCGATAGCTTTGAGCCAGTTTTTGGAGAATAACCAACAACAAGTTAACCTGATGGACAAATCAGTTCTGGAGATTGGAGCTGGGACTGGCTTACTCTCAATAGTGGCCAGTCTGCTCGGTGCTTGGGTGACAGCTACTGACCTGCCAGACATCATGTCTAATCTGACCTTTAACCTCCTGCGGAACACCAGGGGCCGGTCCCGCTACACCCCTCAGGTGGCTGCCCTTACCTGGGCTCAGAACCTGAAGCGAGACTTTCCCTACCCGTCCTACGACTATGTTCTTGCAGCTGATGTGGTCTATCCCCACGGCTGTCTCGAAGAACTGCTGGAAACCATGCGTCACTTTTGCCAACCAGGAAGTCGAACAACGGTTCTGTGGGCCAACAAGATCCGGTTCCAGTCAGACTTGAGGTTCACAGAGTGTTTCAAGAGCAGTTTCAACACCACGCTGCTCATTGAGCTCCCACAGCAGGAGGTGAGGATATACAAGGCCACAGCGAAGGAGTGACAGAGGAATCTGGAGGGTTGGTGTTTaaattgtgagaaaaaaaaaaaaaggaaaattccATTTTACTCTCACTGATTTAAATCAATGTCGAGAAAAGTCTGGTTTTGATCTGTTCACACGACATTCCTGGACAGTGCTCTAACTGTTACAGGGACTGTAATGAAGCTCACATTTCCATTTCAATAAGCAATACTTTTATTTACCAGCACTTTTTCATACAGTTGCTATTCCTGAGTTTATTAACTTTTGCTCAACAATTTGCTTTTACAACTAAATTGATTTGttgtagaaaaaaataataaagaattATGTATATTTTGATTTGTCTCATAACAACAAGACTACATGAACTTTGAGTCAATTATAAACCATGAAATAAACACGAGAAAATGTTTATCAAAAGCATGACACTTTGGTGTCTTATCTTTTGGTATTGCAACAGCAGCAGTTAATTTAGCCGTTTATAGTAAAGACTAAGTCATACATGTCCCTCataaagaactttttttttccattaaatGCAAATATGCAAGAGAGGGAAatcaacatgtttacatgttcaACATGCGACTTTCAGTCAGCACCAAATATATCACATAAGCCCCTcctaaacattttaatttttaaaatccACTTTAAATCTCAAAGCATTACAATAACttaacaaatgcacacacaaagagaagagagtgaacagagagagagggacaaagaaagaagatgaagaaagaaTTGGAGAGGGGGGAGAAAGGATATAATGTCaatatatttcttttcttttttaactcctAAATCTACAATATGTCCATTTCAGGTTAGAAATCCACCTTAATTCTGTTCTTGTTGTTTTCTGCACTCACCAATAAAACTTTAGAGTCTCAAGCGGTTTTAAAACTGTGA

Function

GO: NA

KEGG:

id description
K21805 METTL21C; protein N-lysine methyltransferase METTL21C

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU169277 lncRNA downstream 8233 21001309 ~ 21004378 (-) True G125855
TU169271 lncRNA downstream 13824 20996492 ~ 20998787 (-) True G125852
TU169270 lncRNA downstream 31955 20979001 ~ 20980656 (-) False LOC120569741
TU169262 lncRNA downstream 35696 20974232 ~ 20976915 (-) True G125848
TU169254 lncRNA downstream 52547 20953661 ~ 20960064 (-) True G125842
TU169318 lncRNA upstream 131021 21148489 ~ 21148994 (-) False tmtops2b
TU169341 lncRNA upstream 191318 21208786 ~ 21209743 (-) True G125905
TU169358 lncRNA upstream 259454 21276922 ~ 21279827 (-) False c12h2orf49
TU169374 lncRNA upstream 290425 21307893 ~ 21308995 (-) True G125930
TU169437 lncRNA upstream 389460 21406928 ~ 21409032 (-) False LOC120570342
XM_039817782.1 mRNA downstream 19680 20986969 ~ 20992931 (-) False dcun1d2a
XM_039817781.1 mRNA downstream 21055 20986969 ~ 20991556 (-) True dcun1d2a
XM_039817780.1 mRNA downstream 25978 20979024 ~ 20986633 (-) False LOC120569741
XM_039817779.1 mRNA downstream 25978 20979024 ~ 20986633 (-) True LOC120569741
XM_039818219.1 mRNA downstream 44975 20960073 ~ 20967636 (-) True LOC120569994
XM_039817222.1 mRNA upstream 2118 21019586 ~ 21023880 (-) False LOC120569351
XM_039817220.1 mRNA upstream 2118 21019586 ~ 21023879 (-) True LOC120569351
XM_039818015.1 mRNA upstream 93719 21111187 ~ 21149005 (-) False tmtops2b
XM_039818014.1 mRNA upstream 93719 21111187 ~ 21149005 (-) True tmtops2b
XM_039818025.1 mRNA upstream 176825 21194293 ~ 21198088 (-) False ecrg4a
TU169256 other downstream 52547 20958323 ~ 20960064 (-) False G125842
XR_005641101.1 other downstream 148658 20863785 ~ 20863953 (-) True LOC120570677
TU168946 other downstream 545426 20464109 ~ 20467185 (-) True G125620
TU168944 other downstream 550982 20459162 ~ 20461629 (-) True G125619
TU168785 other downstream 1088917 19921354 ~ 19923694 (-) False si:ch211-214p13.7
TU169333 other upstream 175440 21192908 ~ 21198041 (-) True ecrg4a
XR_005640943.1 other upstream 438098 21455566 ~ 21461127 (-) False cracdla
TU169712 other upstream 1214617 22232085 ~ 22234857 (-) False LOC120569718
XR_005641037.1 other upstream 1514166 22531634 ~ 22582407 (-) False si:dkey-100n23.5
TU169814 other upstream 1607713 22625181 ~ 22629099 (-) False katnal1

Expression Profile