Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039818978.1 |
| length | 1040 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | atp5mc3a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 17730065 ~ 17732592 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0015986 | ATP synthesis coupled proton transport | biological_process |
| GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008289 | lipid binding | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| id | description |
|---|---|
| K02128 | ATPeF0C, ATP5G, ATP9; F-type H+-transporting ATPase subunit c |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU167694 | lncRNA | downstream | 379319 | 17347911 ~ 17350746 (-) | True | G124691 |
| TU167666 | lncRNA | downstream | 391805 | 17248369 ~ 17338260 (-) | True | G124673 |
| TU167700 | lncRNA | downstream | 435425 | 17291927 ~ 17294640 (-) | True | G124695 |
| TU167696 | lncRNA | downstream | 439627 | 17287949 ~ 17290438 (-) | True | G124693 |
| TU167672 | lncRNA | downstream | 499949 | 17227899 ~ 17230116 (-) | True | G124679 |
| XR_005640878.1 | lncRNA | upstream | 4746 | 17737284 ~ 17822487 (-) | False | LOC120569506 |
| XR_005640876.1 | lncRNA | upstream | 4746 | 17737284 ~ 17822487 (-) | False | LOC120569506 |
| XR_005640877.1 | lncRNA | upstream | 4746 | 17737284 ~ 17822487 (-) | True | LOC120569506 |
| TU167930 | lncRNA | upstream | 289871 | 18022409 ~ 18023477 (-) | True | G124872 |
| TU168090 | lncRNA | upstream | 359789 | 18092327 ~ 18092530 (-) | True | G125000 |
| XM_039818527.1 | mRNA | downstream | 726 | 17712254 ~ 17729339 (-) | False | atf2 |
| XM_039818525.1 | mRNA | downstream | 727 | 17712254 ~ 17729338 (-) | True | atf2 |
| XM_039818526.1 | mRNA | downstream | 860 | 17712254 ~ 17729205 (-) | False | atf2 |
| XM_039818601.1 | mRNA | downstream | 47221 | 17672214 ~ 17682844 (-) | False | chn1 |
| XM_039818600.1 | mRNA | downstream | 47222 | 17672214 ~ 17682843 (-) | True | chn1 |
| XM_039817996.1 | mRNA | upstream | 94540 | 17827078 ~ 17836086 (-) | True | lnpa |
| XM_039817997.1 | mRNA | upstream | 120331 | 17852869 ~ 17857052 (-) | True | evx2 |
| XM_039817797.1 | mRNA | upstream | 285541 | 18018079 ~ 18025208 (-) | True | nfe2l2a |
| XM_039818618.1 | mRNA | upstream | 333480 | 18066018 ~ 18112342 (-) | True | pde11a |
| XM_039817109.1 | mRNA | upstream | 380977 | 18113515 ~ 18115097 (-) | False | LOC120569287 |
| TU167228 | other | downstream | 1349300 | 16378609 ~ 16380765 (-) | False | gcgb |
| TU167157 | other | downstream | 1628472 | 16099278 ~ 16101593 (-) | True | G124303 |
| unassigned_transcript_607 | other | downstream | 2312793 | 15417200 ~ 15417272 (-) | True | trnak-uuu_17 |
| TU166697 | other | downstream | 2736276 | 14984485 ~ 14993789 (-) | True | G123960 |
| TU166600 | other | downstream | 2940159 | 14784561 ~ 14789906 (-) | False | G123886 |
| TU168094 | other | upstream | 380572 | 18113110 ~ 18115089 (-) | True | LOC120569287 |
| TU168092 | other | upstream | 380972 | 18113510 ~ 18115089 (-) | False | LOC120569287 |
| TU168093 | other | upstream | 381034 | 18113572 ~ 18115089 (-) | False | LOC120569287 |
| XR_005640956.1 | other | upstream | 424194 | 18156732 ~ 18163749 (-) | False | prkra |
| TU168240 | other | upstream | 962942 | 18695480 ~ 18699802 (-) | True | G125089 |
