Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039819133.1 |
| length | 1054 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 8 |
| gene id | LOC120570655 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053123.1 |
| NCBI id | CM020920.1 |
| chromosome length | 39440604 |
| location | 12060670 ~ 12113263 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006367 | transcription initiation from RNA polymerase II promoter | biological_process |
| GO:0005674 | transcription factor TFIIF complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003824 | catalytic activity | molecular_function |
| id | description |
|---|---|
| K03139 | TFIIF2, GTF2F2, TFG2; transcription initiation factor TFIIF subunit beta |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU165958 | lncRNA | upstream | 44165 | 12014772 ~ 12016505 (+) | True | G123374 |
| TU165953 | lncRNA | upstream | 47470 | 12007673 ~ 12013200 (+) | True | serp2 |
| TU165877 | lncRNA | upstream | 213284 | 11847057 ~ 11847386 (+) | True | G123324 |
| TU165876 | lncRNA | upstream | 213721 | 11845673 ~ 11846949 (+) | True | G123323 |
| TU165872 | lncRNA | upstream | 215205 | 11843380 ~ 11845465 (+) | True | G123322 |
| TU165968 | lncRNA | downstream | 784 | 12114047 ~ 12115217 (+) | False | G123384 |
| TU165972 | lncRNA | downstream | 784 | 12114047 ~ 12213222 (+) | True | G123384 |
| TU165974 | lncRNA | downstream | 5118 | 12118381 ~ 12140323 (+) | True | G123386 |
| TU165975 | lncRNA | downstream | 5118 | 12118381 ~ 12131452 (+) | False | G123386 |
| TU165977 | lncRNA | downstream | 5118 | 12118381 ~ 12178012 (+) | False | G123386 |
| XM_039817233.1 | mRNA | upstream | 47933 | 12007657 ~ 12012737 (+) | False | serp2 |
| XM_039817832.1 | mRNA | upstream | 79834 | 11949114 ~ 11980836 (+) | True | LOC120569768 |
| XM_039817935.1 | mRNA | downstream | 71203 | 12184466 ~ 12185606 (+) | True | tmem223 |
| XM_039818745.1 | mRNA | downstream | 139841 | 12253104 ~ 12261257 (+) | True | LOC120570413 |
| XM_039818743.1 | mRNA | downstream | 140158 | 12253421 ~ 12261257 (+) | False | LOC120570413 |
| XM_039817398.1 | mRNA | downstream | 512711 | 12625974 ~ 12632469 (+) | True | stx19 |
| XM_039818451.1 | mRNA | downstream | 823712 | 12936975 ~ 12947546 (+) | True | zgc:152951 |
| TU165581 | other | upstream | 1441974 | 10607484 ~ 10618696 (+) | False | lrp1bb |
| TU165424 | other | upstream | 2131779 | 9926817 ~ 9928891 (+) | False | umps |
| TU165423 | other | upstream | 2135830 | 9920711 ~ 9924840 (+) | False | umps |
| TU165208 | other | upstream | 3263924 | 8795453 ~ 8796746 (+) | True | G122846 |
| TU164880 | other | upstream | 4911631 | 7146625 ~ 7149039 (+) | True | G122588 |
| TU166170 | other | downstream | 936495 | 13049758 ~ 13279866 (+) | True | G123539 |
| TU166270 | other | downstream | 1240043 | 13353306 ~ 13354085 (+) | True | G123633 |
| TU166312 | other | downstream | 1522323 | 13635586 ~ 13677346 (+) | False | cps1 |
| TU166397 | other | downstream | 2120069 | 14233332 ~ 14234070 (+) | True | G123742 |
| XR_005640926.1 | other | downstream | 3025214 | 15138477 ~ 15155886 (+) | False | trpm2 |
