RNA id: TU18607



Basic Information


Item Value
RNA id TU18607
length 709
RNA type TUCP
GC content 0.47
exon number 5
gene id G13995
representative True

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 2981061 ~ 2984498 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


atacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttcttactTCTTCAGGTGCATGACGACCTGTGGCAGCAGCGTGAGCTTTTTCAGCGCTGGTTTCTTCTGACTGTTGAGAGTTCGATCCTCCTCCGCGGCTTCGTTCATCTTGCTGATCATGGCGCTGACCACGTCGTCGGCGTCGCTGATGAACGTCCCTCCGTCGCGGTGCCGCCGTTTCCTGCTGTTCATGGCTTTCCTCTTAGCGAGCATGATGTCAAAGTCGGACATGAAGCtggtaTCTTGGCCGCTGCGGTCGACCCCTTCGTCCGAGTCCGactgctcctgctgctcctgctcCTCCTTCGCCTCCTTCTTGTCCCCCTCTAGATCCTCCTGGTTGAAACCCGtgaactcctcttcctcttcgtcTCCGGACTCCCCAAAGATGTCGGCGATCATTTTCtcctcctcctcgcctTCGCCCGATTCGCTGTCGCTGCCGAACAGCGCCTTCTCGTCCTTCTGGCCGCCGCCGGCGGCCTTGGCGCGCTCGTCGTCCTCGCTGCCGCTGTCCGAGCCCAGCTCTCTCAGCTTGGCCGCCATGCTCTTGTCGGGGGCGAGCGAGCCCGCCGTCGTCGTCGCTGTCCGAGTTCCCGTCGTCCGACACCGCCCGGCTCCTCTTGGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU18594 lncRNA downstream 716 2977860 ~ 2980345 (-) False G13984
TU18593 lncRNA downstream 716 2979727 ~ 2980345 (-) False G13984
TU18601 lncRNA downstream 12453 2964592 ~ 2968608 (-) True G13991
TU18576 lncRNA downstream 95431 2885295 ~ 2885630 (-) True G13970
TU18575 lncRNA downstream 97013 2882907 ~ 2884048 (-) True G13969
TU18611 lncRNA upstream 826 2985324 ~ 2985574 (-) True G13997
TU19189 lncRNA upstream 132209 3116707 ~ 3126213 (-) True G14383
TU19185 lncRNA upstream 243577 3228075 ~ 3228624 (-) False LOC120570817
XR_005641295.1 lncRNA upstream 417970 3402468 ~ 3410949 (-) True LOC120571770
TU19243 lncRNA upstream 488439 3472937 ~ 3476382 (-) False G14426
XM_039819966.1 mRNA downstream 8344 2970130 ~ 2972717 (-) True wdr74
XM_039778662.1 mRNA downstream 891752 2077680 ~ 2089309 (-) True LOC120544710
XM_039778640.1 mRNA downstream 926338 2041770 ~ 2054723 (-) True LOC120544691
XM_039778634.1 mRNA downstream 953112 2024856 ~ 2027949 (-) True LOC120544682
XM_039820336.1 mRNA downstream 961915 1994746 ~ 2019146 (-) False LOC120571401
XM_039820469.1 mRNA upstream 16655 3001153 ~ 3010061 (-) True ostn
XM_039819385.1 mRNA upstream 72231 3056729 ~ 3228824 (-) True LOC120570817
XM_039820150.1 mRNA upstream 78932 3063430 ~ 3238792 (-) True LOC120571282
XM_039819780.1 mRNA upstream 102966 3087464 ~ 3165911 (-) True LOC120571072
XM_039820187.1 mRNA upstream 107664 3092162 ~ 3094329 (-) True LOC120571301
TU18155 other downstream 1599340 1302896 ~ 1381721 (-) True G13651
XR_005641165.1 other downstream 1783337 1166600 ~ 1197724 (-) False LOC120571038
TU18084 other downstream 1783375 1127891 ~ 1197686 (-) True G13587
XR_005641166.1 other downstream 1804318 1166598 ~ 1176743 (-) False LOC120571038
TU18086 other downstream 2003362 969696 ~ 977699 (-) False LOC120571545
XR_005638387.1 other upstream 289178 3273676 ~ 3273783 (-) True LOC120554376
XR_005638377.1 other upstream 290680 3275178 ~ 3275285 (-) True LOC120554353
XR_005638380.1 other upstream 292184 3276682 ~ 3276791 (-) True LOC120554360
XR_005638379.1 other upstream 293674 3278172 ~ 3278279 (-) True LOC120554359
XR_005638383.1 other upstream 295113 3279611 ~ 3279720 (-) True LOC120554366

Expression Profile