RNA id: TU18822


Basic Information

Item Value
RNA id TU18822
length 217
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G14159
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4057794 ~ 4058302 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AAGGGAGGGCAGCAGTTGACCAGGGCGATGGTTTTGGACACGTATCCGTCCTCGTTGTCCCCGAACATGCCGCTCTGCATCGCCTCATGAAACATCTCAACCTTACGCTGAAAACTATACAGGAAGTCTGCCAGGCCGTTGAGGCTGCACTGAGCCACTCTGGAGCCCAAACTCCTGTTGATGGAGGCCGAACGCTCAAGATCCACCTGCAGCCTct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18802 lncRNA upstream 2709 4019244 ~ 4055085 (+) False G14148
TU18799 lncRNA upstream 2709 4048774 ~ 4055085 (+) False G14148
TU18791 lncRNA upstream 4821 4048774 ~ 4052973 (+) True G14148
TU18795 lncRNA upstream 4821 4048774 ~ 4052973 (+) False G14148
TU18798 lncRNA upstream 4821 4048774 ~ 4052973 (+) False G14148
TU18832 lncRNA downstream 19496 4077798 ~ 4122053 (+) False G14162
TU18829 lncRNA downstream 34961 4093263 ~ 4122053 (+) False G14162
TU18831 lncRNA downstream 44230 4102532 ~ 4122053 (+) False G14162
TU18828 lncRNA downstream 49103 4107405 ~ 4122053 (+) False G14162
TU18830 lncRNA downstream 60894 4119196 ~ 4120870 (+) True G14162
XM_039820162.1 mRNA upstream 514589 3537939 ~ 3543205 (+) True LOC120571287
XM_039778719.1 mRNA upstream 755332 3299916 ~ 3302462 (+) True LOC120544772
XM_039778718.1 mRNA upstream 757898 3297981 ~ 3299896 (+) True LOC120544755
XM_039820116.1 mRNA upstream 759290 3295431 ~ 3298504 (+) True LOC120571257
XM_039819937.1 mRNA upstream 1013644 3034809 ~ 3044150 (+) False gmnc
XM_039778795.1 mRNA downstream 92280 4150582 ~ 4154516 (+) True LOC120544917
XM_039820076.1 mRNA downstream 127604 4185906 ~ 4199356 (+) True LOC120571237
XM_039820085.1 mRNA downstream 127604 4185906 ~ 4199356 (+) False LOC120571237
XM_039820095.1 mRNA downstream 127604 4185906 ~ 4199356 (+) False LOC120571237
XM_039820104.1 mRNA downstream 127604 4185906 ~ 4199356 (+) False LOC120571237
TU18797 other upstream 2709 4048774 ~ 4055085 (+) False G14148
XR_005638374.1 other upstream 709872 3347816 ~ 3347922 (+) True LOC120554338
XR_005638523.1 other upstream 749322 3308282 ~ 3308472 (+) True LOC120554582
XR_005638542.1 other upstream 750811 3306793 ~ 3306983 (+) True LOC120554643
XR_005638519.1 other upstream 752310 3305294 ~ 3305484 (+) True LOC120554577
TU18913 other downstream 305364 4363666 ~ 4372769 (+) False LOC120570718
TU18980 other downstream 309301 4367603 ~ 4420822 (+) False G14246
XR_005641110.1 other downstream 310771 4369073 ~ 4399043 (+) False LOC120570718
TU18942 other downstream 441871 4500173 ~ 4527377 (+) True G14209
TU18878 other downstream 1029522 5087824 ~ 5088672 (+) False G14187

Expression Profile