RNA id: TU18832



Basic Information


Item Value
RNA id TU18832
length 315
lncRNA type inter_gene
GC content 0.44
exon number 3
gene id G14162
representative False

Chromosome Information


Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 4077798 ~ 4122053 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctttgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU18822 lncRNA upstream 19496 4057794 ~ 4058302 (+) True G14159
TU18799 lncRNA upstream 22713 4048774 ~ 4055085 (+) False G14148
TU18791 lncRNA upstream 24825 4048774 ~ 4052973 (+) True G14148
TU18795 lncRNA upstream 24825 4048774 ~ 4052973 (+) False G14148
TU18798 lncRNA upstream 24825 4048774 ~ 4052973 (+) False G14148
TU18838 lncRNA downstream 11146 4133199 ~ 4133655 (+) True G14168
TU18841 lncRNA downstream 21034 4143087 ~ 4143303 (+) True G14171
TU18842 lncRNA downstream 24264 4146317 ~ 4146743 (+) True G14172
XR_005641291.1 lncRNA downstream 32613 4154666 ~ 4162299 (+) True LOC120571758
TU18919 lncRNA downstream 115524 4237577 ~ 4239285 (+) False LOC120571647
XM_039820162.1 mRNA upstream 534593 3537939 ~ 3543205 (+) True LOC120571287
XM_039778719.1 mRNA upstream 775336 3299916 ~ 3302462 (+) True LOC120544772
XM_039778718.1 mRNA upstream 777902 3297981 ~ 3299896 (+) True LOC120544755
XM_039820116.1 mRNA upstream 779294 3295431 ~ 3298504 (+) True LOC120571257
XM_039819937.1 mRNA upstream 1033648 3034809 ~ 3044150 (+) False gmnc
XM_039778795.1 mRNA downstream 28529 4150582 ~ 4154516 (+) True LOC120544917
XM_039820076.1 mRNA downstream 63853 4185906 ~ 4199356 (+) True LOC120571237
XM_039820085.1 mRNA downstream 63853 4185906 ~ 4199356 (+) False LOC120571237
XM_039820095.1 mRNA downstream 63853 4185906 ~ 4199356 (+) False LOC120571237
XM_039820104.1 mRNA downstream 63853 4185906 ~ 4199356 (+) False LOC120571237
TU18797 other upstream 22713 4048774 ~ 4055085 (+) False G14148
XR_005638374.1 other upstream 729876 3347816 ~ 3347922 (+) True LOC120554338
XR_005638523.1 other upstream 769326 3308282 ~ 3308472 (+) True LOC120554582
XR_005638542.1 other upstream 770815 3306793 ~ 3306983 (+) True LOC120554643
XR_005638519.1 other upstream 772314 3305294 ~ 3305484 (+) True LOC120554577
TU18913 other downstream 241613 4363666 ~ 4372769 (+) False LOC120570718
TU18980 other downstream 245550 4367603 ~ 4420822 (+) False G14246
XR_005641110.1 other downstream 247020 4369073 ~ 4399043 (+) False LOC120570718
TU18942 other downstream 378120 4500173 ~ 4527377 (+) True G14209
TU18878 other downstream 965771 5087824 ~ 5088672 (+) False G14187

Expression Profile