RNA id: TU18944


Basic Information

Item Value
RNA id TU18944
length 292
lncRNA type inter_gene
GC content 0.47
exon number 4
gene id G14211
representative True

Chromosome Information

Item Value
chromosome id NC_053113.1
NCBI id CM020910.1
chromosome length 48524041
location 5125817 ~ 5159690 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacaaagaaagacacacacacacacagacacacacaggtacgatacacacacacacagacacacacatgtacgatacacacagatagaaaTCCACTGACAGGCACagatagacaaacatatcacacacagacacacacacacacacacacacagacacacacagacagacacacacacacacacacacagacagacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacagagacacacacacacacaaacacacacacagac

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU18868 lncRNA upstream 12720 4923823 ~ 5113097 (+) True G14187
TU18883 lncRNA upstream 14195 4923823 ~ 5111622 (+) False G14187
TU18861 lncRNA upstream 14195 5036813 ~ 5111622 (+) False G14187
TU18876 lncRNA upstream 14195 5062975 ~ 5111622 (+) False G14187
XR_005641261.1 lncRNA upstream 37720 4864864 ~ 5088097 (+) True LOC120571679
TU19076 lncRNA downstream 48660 5208350 ~ 5209612 (+) True G14316
TU19078 lncRNA downstream 53501 5213191 ~ 5306999 (+) True G14317
TU19081 lncRNA downstream 54621 5214311 ~ 5262960 (+) True G14318
TU19085 lncRNA downstream 75278 5234968 ~ 5249597 (+) True G14322
TU19088 lncRNA downstream 76096 5235786 ~ 5250987 (+) True G14323
XM_039819633.1 mRNA upstream 61841 4922087 ~ 5063976 (+) True LOC120570934
XM_039820708.1 mRNA upstream 273242 4237571 ~ 4852575 (+) True LOC120571647
XM_039819208.1 mRNA upstream 675987 4369069 ~ 4449830 (+) True LOC120570718
XM_039778846.1 mRNA upstream 900500 4223592 ~ 4225317 (+) True LOC120544944
XM_039820104.1 mRNA upstream 926461 4185906 ~ 4199356 (+) False LOC120571237
XM_039820381.1 mRNA downstream 6521 5166211 ~ 5173445 (+) True LOC120571428
XM_039820373.1 mRNA downstream 6521 5166211 ~ 5173445 (+) False LOC120571428
XM_039819884.1 mRNA downstream 59960 5219650 ~ 5230445 (+) False LOC120571154
XM_039819901.1 mRNA downstream 59960 5219650 ~ 5230445 (+) False LOC120571154
XM_039819910.1 mRNA downstream 59965 5219655 ~ 5230445 (+) False LOC120571154
TU18878 other upstream 37145 5087824 ~ 5088672 (+) False G14187
TU18942 other upstream 598440 4500173 ~ 4527377 (+) True G14209
TU18980 other upstream 704995 4367603 ~ 4420822 (+) False G14246
XR_005641110.1 other upstream 726774 4369073 ~ 4399043 (+) False LOC120570718
TU18913 other upstream 753048 4363666 ~ 4372769 (+) False LOC120570718
TU19140 other downstream 351067 5510757 ~ 5521881 (+) True G14344
TU19135 other downstream 354111 5513801 ~ 5518149 (+) False G14344
TU19963 other downstream 1248353 6408043 ~ 6413375 (+) False spcs2
TU19929 other downstream 1254897 6414587 ~ 6416070 (+) False spcs2
TU19934 other downstream 1254897 6414587 ~ 6415544 (+) False spcs2

Expression Profile